Information for 7-TGCATGCTGG (Motif 6)

C A G T A T C G G T A C G C T A G C A T A C T G A G T C A G C T A C T G C T A G
Reverse Opposite:
A G T C A G T C C T G A T C A G G T A C C G T A C G A T A C T G A T G C G T C A
p-value:1e-12
log p-value:-2.929e+01
Information Content per bp:1.856
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.39%
Number of Background Sequences with motif131.5
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets54.2 +/- 25.3bp
Average Position of motif in Background52.6 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0206.1_Zic2_2/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TGCATGCTGG----
TCNCCTGCTGNGNNN
 A C G T C A G T A T C G G T A C G C T A G C A T A C T G A G T C A G C T A C T G C T A G A C G T A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TGCATGCTGG-----
RGSMTBCTGGGAAAT
 C A G T A T C G G T A C G C T A G C A T A C T G A G T C A G C T A C T G C T A G A C G T A C G T A C G T A C G T A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TGCATGCTGG--
--CCTGCTGAGH
 C A G T A T C G G T A C G C T A G C A T A C T G A G T C A G C T A C T G C T A G A C G T A C G T
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

ZNF143/MA0088.2/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TGCATGCTGG---
CAATGCATTGTGGGTA
 A C G T A C G T A C G T C A G T A T C G G T A C G C T A G C A T A C T G A G T C A G C T A C T G C T A G A C G T A C G T A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGCATGCTGG----
NNTCCTGCTGTGNNN
 A C G T C A G T A T C G G T A C G C T A G C A T A C T G A G T C A G C T A C T G C T A G A C G T A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGCATGCTGG----
TNTCCTGCTGTGNNG
 A C G T C A G T A T C G G T A C G C T A G C A T A C T G A G T C A G C T A C T G C T A G A C G T A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

GCM1/MA0646.1/Jaspar

Match Rank:7
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TGCATGCTGG---
--CATGCGGGTAC
 C A G T A T C G G T A C G C T A G C A T A C T G A G T C A G C T A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

GCM2/MA0767.1/Jaspar

Match Rank:8
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TGCATGCTGG--
--TATGCGGGTA
 C A G T A T C G G T A C G C T A G C A T A C T G A G T C A G C T A C T G C T A G A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

PB0024.1_Gcm1_1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGCATGCTGG-----
NNNNATGCGGGTNNNN
 A C G T C A G T A T C G G T A C G C T A G C A T A C T G A G T C A G C T A C T G C T A G A C G T A C G T A C G T A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGCATGCTGG-
CCCCCTGCTGTG
 A C G T C A G T A T C G G T A C G C T A G C A T A C T G A G T C A G C T A C T G C T A G A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G