Information for 2-GGGGCGGGGCCDS (Motif 2)

C A T G C T A G A C T G A C T G G T A C A C T G A C T G C T A G T A C G G A T C A G T C C A G T T A C G
Reverse Opposite:
A T G C G T C A T C A G C T A G A T G C G A T C T G A C A G T C A C T G A G T C A G T C A G T C G T A C
p-value:1e-42
log p-value:-9.888e+01
Information Content per bp:1.672
Number of Target Sequences with motif207.0
Percentage of Target Sequences with motif23.55%
Number of Background Sequences with motif3888.9
Percentage of Background Sequences with motif8.18%
Average Position of motif in Targets52.2 +/- 25.0bp
Average Position of motif in Background48.6 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.42
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-GGGGCGGGGCCDS
GGGGGCGGGGCC--
 A C G T C A T G C T A G A C T G A C T G G T A C A C T G A C T G C T A G T A C G G A T C A G T C C A G T T A C G
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.94
Offset:-2
Orientation:forward strand
Alignment:--GGGGCGGGGCCDS
AGGGGGCGGGGCTG-
 A C G T A C G T C A T G C T A G A C T G A C T G G T A C A C T G A C T G C T A G T A C G G A T C A G T C C A G T T A C G
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T

SP2/MA0516.1/Jaspar

Match Rank:3
Score:0.90
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGCGGGGCCDS
GGGNGGGGGCGGGGC---
 A C G T A C G T A C G T A C G T A C G T C A T G C T A G A C T G A C T G G T A C A C T G A C T G C T A G T A C G G A T C A G T C C A G T T A C G
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:4
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-GGGGCGGGGCCDS
GGGGGCGGGGC---
 A C G T C A T G C T A G A C T G A C T G G T A C A C T G A C T G C T A G T A C G G A T C A G T C C A G T T A C G
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:5
Score:0.89
Offset:-3
Orientation:reverse strand
Alignment:---GGGGCGGGGCCDS
NNAGGGGCGGGGTNNA
 A C G T A C G T A C G T C A T G C T A G A C T G A C T G G T A C A C T G A C T G C T A G T A C G G A T C A G T C C A G T T A C G
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

KLF5/MA0599.1/Jaspar

Match Rank:6
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:GGGGCGGGGCCDS
GGGGNGGGGC---
 C A T G C T A G A C T G A C T G G T A C A C T G A C T G C T A G T A C G G A T C A G T C C A G T T A C G
C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:7
Score:0.87
Offset:-2
Orientation:forward strand
Alignment:--GGGGCGGGGCCDS
RGKGGGCGGAGC---
 A C G T A C G T C A T G C T A G A C T G A C T G G T A C A C T G A C T G C T A G T A C G G A T C A G T C C A G T T A C G
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:8
Score:0.87
Offset:-3
Orientation:reverse strand
Alignment:---GGGGCGGGGCCDS
NNVDGGGYGGGGCYN-
 A C G T A C G T A C G T C A T G C T A G A C T G A C T G G T A C A C T G A C T G C T A G T A C G G A T C A G T C C A G T T A C G
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--GGGGCGGGGCCDS
RGKGGGCGKGGC---
 A C G T A C G T C A T G C T A G A C T G A C T G G T A C A C T G A C T G C T A G T A C G G A T C A G T C C A G T T A C G
C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C A C G T A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-GGGGCGGGGCCDS
MKGGGYGTGGCC--
 A C G T C A T G C T A G A C T G A C T G G T A C A C T G A C T G C T A G T A C G G A T C A G T C C A G T T A C G
G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C A C G T A C G T