Information for 6-SCWYGSMCSCACGGCY (Motif 3)

A T G C A T G C C G T A G A C T A C T G A T C G G T C A A G T C A T C G A G T C C G T A A G T C C T A G A C T G A G T C A G T C
Reverse Opposite:
C T A G A C T G A G T C A G T C A C T G A C G T A C T G A T G C A C T G A C G T A T G C A G T C C T G A C G A T A T C G A T C G
p-value:1e-15
log p-value:-3.554e+01
Information Content per bp:1.816
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.3 +/- 19.9bp
Average Position of motif in Background68.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:1
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:SCWYGSMCSCACGGCY
---TGCCCNNAGGGCA
 A T G C A T G C C G T A G A C T A C T G A T C G G T C A A G T C A T C G A G T C C G T A A G T C C T A G A C T G A G T C A G T C
A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:2
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:SCWYGSMCSCACGGCY
--------GCACGTNC
 A T G C A T G C C G T A G A C T A C T G A T C G G T C A A G T C A T C G A G T C C G T A A G T C C T A G A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:SCWYGSMCSCACGGCY
---TGCCCTNAGGGCA
 A T G C A T G C C G T A G A C T A C T G A T C G G T C A A G T C A T C G A G T C C G T A A G T C C T A G A C T G A G T C A G T C
A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:forward strand
Alignment:SCWYGSMCSCACGGCY
---TGCCCTGAGGGCA
 A T G C A T G C C G T A G A C T A C T G A T C G G T C A A G T C A T C G A G T C C G T A A G T C C T A G A C T G A G T C A G T C
A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:SCWYGSMCSCACGGCY
--TGGGGCCCAC----
 A T G C A T G C C G T A G A C T A C T G A T C G G T C A A G T C A T C G A G T C C G T A A G T C C T A G A C T G A G T C A G T C
A C G T A C G T G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:SCWYGSMCSCACGGCY
AGCGGCACACACGCAA
 A T G C A T G C C G T A G A C T A C T G A T C G G T C A A G T C A T C G A G T C C G T A A G T C C T A G A C T G A G T C A G T C
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:7
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:SCWYGSMCSCACGGCY
--------GCACGTAY
 A T G C A T G C C G T A G A C T A C T G A T C G G T C A A G T C A T C G A G T C C G T A A G T C C T A G A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

SP3/MA0746.1/Jaspar

Match Rank:8
Score:0.51
Offset:7
Orientation:forward strand
Alignment:SCWYGSMCSCACGGCY--
-------GCCACGCCCCC
 A T G C A T G C C G T A G A C T A C T G A T C G G T C A A G T C A T C G A G T C C G T A A G T C C T A G A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:9
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:SCWYGSMCSCACGGCY
---YCCGCCCACGCN-
 A T G C A T G C C G T A G A C T A C T G A T C G G T C A A G T C A T C G A G T C C G T A A G T C C T A G A C T G A G T C A G T C
A C G T A C G T A C G T G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:10
Score:0.50
Offset:2
Orientation:forward strand
Alignment:SCWYGSMCSCACGGCY
--TBGCACGCAA----
 A T G C A T G C C G T A G A C T A C T G A T C G G T C A A G T C A T C G A G T C C G T A A G T C C T A G A C T G A G T C A G T C
A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T A C G T