Information for 9-CAGACCACCT (Motif 25)

A G T C C G T A A C T G C G T A A G T C A G T C C G T A G T A C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A C G T A C T G A C T G A C G T A G T C A C G T A C T G
p-value:1e-3
log p-value:-7.337e+00
Information Content per bp:1.965
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif18.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets48.2 +/- 34.3bp
Average Position of motif in Background54.0 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:1
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---CAGACCACCT----
CATAAGACCACCATTAC
 A C G T A C G T A C G T A G T C C G T A A C T G C G T A A G T C A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

ZBTB7C/MA0695.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CAGACCACCT--
GCGACCACCGAA
 A G T C C G T A A C T G C G T A A G T C A G T C C G T A G T A C A G T C A C G T A C G T A C G T
C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A

FIGLA/MA0820.1/Jaspar

Match Rank:3
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CAGACCACCT---
---ACCACCTGTT
 A G T C C G T A A C T G C G T A A G T C A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CAGACCACCT---
-GGACCACCCACG
 A G T C C G T A A C T G C G T A A G T C A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T
A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

ZBTB7A/MA0750.1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CAGACCACCT-
GGCGACCACCGA
 A C G T A G T C C G T A A C T G C G T A A G T C A G T C C G T A G T A C A G T C A C G T A C G T
A C T G T C A G A T G C C T A G G T C A A G T C A T G C G T C A A G T C G T A C C A T G T G C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CAGACCACCT
CCAGACRSVB-
 A C G T A G T C C G T A A C T G C G T A A G T C A G T C C G T A G T A C A G T C A C G T
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

ZBTB7B/MA0694.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CAGACCACCT--
GCGACCACCGAA
 A G T C C G T A A C T G C G T A A G T C A G T C C G T A G T A C A G T C A C G T A C G T A C G T
C T A G T A G C C T A G G T C A T G A C A T G C G T C A G T A C A G T C T C A G G C T A G T C A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CAGACCACCT
BCAGACWA---
 A C G T A G T C C G T A A C T G C G T A A G T C A G T C C G T A G T A C A G T C A C G T
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CAGACCACCT---
---NNCACCTGNN
 A G T C C G T A A C T G C G T A A G T C A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CAGACCACCT
CCAGACAG---
 A C G T A G T C C G T A A C T G C G T A A G T C A G T C C G T A G T A C A G T C A C G T
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T