Information for 2-CAGGCAGGBAGGVAGG (Motif 7)

G T A C C G T A A T C G C A T G A G T C C T G A A C T G T C A G A T G C C G T A A C T G C A T G T A G C C G T A T A C G T A C G
Reverse Opposite:
A T G C A G T C A C G T A T C G G A T C A G T C A C G T T A C G A G T C A G T C A G C T T A C G G T A C A T G C G C A T C A T G
p-value:1e-8
log p-value:-2.036e+01
Information Content per bp:1.679
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif6.10%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets56.8 +/- 22.9bp
Average Position of motif in Background30.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CAGGCAGGBAGGVAGG
GGAAGGAAGGAAGGAAGG
 A C G T A C G T G T A C C G T A A T C G C A T G A G T C C T G A A C T G T C A G A T G C C G T A A C T G C A T G T A G C C G T A T A C G T A C G
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCAGGBAGGVAGG
SCAGYCADGCATGAC--
 A C G T G T A C C G T A A T C G C A T G A G T C C T G A A C T G T C A G A T G C C G T A A C T G C A T G T A G C C G T A T A C G T A C G
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CAGGCAGGBAGGVAGG
-TGGCAGNCTGCCAG-
 G T A C C G T A A T C G C A T G A G T C C T G A A C T G T C A G A T G C C G T A A C T G C A T G T A G C C G T A T A C G T A C G
A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:4
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CAGGCAGGBAGGVAGG
---ACAGGAAGTG---
 G T A C C G T A A T C G C A T G A G T C C T G A A C T G T C A G A T G C C G T A A C T G C A T G T A G C C G T A T A C G T A C G
A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.51
Offset:8
Orientation:forward strand
Alignment:CAGGCAGGBAGGVAGG---
--------AAGGCAAGTGT
 G T A C C G T A A T C G C A T G A G T C C T G A A C T G T C A G A T G C C G T A A C T G C A T G T A G C C G T A T A C G T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCAGGBAGGVAGG---
YCAGGCWCAGTACCAGGCTC
 A C G T G T A C C G T A A T C G C A T G A G T C C T G A A C T G T C A G A T G C C G T A A C T G C A T G T A G C C G T A T A C G T A C G A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CAGGCAGGBAGGVAGG
---ACAGGAAGTG---
 G T A C C G T A A T C G C A T G A G T C C T G A A C T G T C A G A T G C C G T A A C T G C A T G T A G C C G T A T A C G T A C G
A C G T A C G T A C G T T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G A C G T A C G T A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:8
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CAGGCAGGBAGGVAGG
BAGTCATANTGAAAG-
 G T A C C G T A A T C G C A T G A G T C C T G A A C T G T C A G A T G C C G T A A C T G C A T G T A G C C G T A T A C G T A C G
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G A C G T

E2F6/MA0471.1/Jaspar

Match Rank:9
Score:0.49
Offset:6
Orientation:forward strand
Alignment:CAGGCAGGBAGGVAGG-
------GGGCGGGAAGG
 G T A C C G T A A T C G C A T G A G T C C T G A A C T G T C A G A T G C C G T A A C T G C A T G T A G C C G T A T A C G T A C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCAGGBAGGVAGG
CCAGACAG---------
 A C G T G T A C C G T A A T C G C A T G A G T C C T G A A C T G T C A G A T G C C G T A A C T G C A T G T A G C C G T A T A C G T A C G
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T