Information for 4-CCCTTAGGAC (Motif 10)

A G T C A G T C A G T C A C G T A G C T C G T A A C T G A C T G G T C A A G T C
Reverse Opposite:
A C T G A C G T A G T C A G T C C G A T C T G A C G T A A C T G A C T G A C T G
p-value:1e-6
log p-value:-1.562e+01
Information Content per bp:1.905
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif4.88%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.2 +/- 23.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CCCTTAGGAC--
SCCTSAGGSCAW
 A G T C A G T C A G T C A C G T A G C T C G T A A C T G A C T G G T C A A G T C A C G T A C G T
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CCCTTAGGAC--
GCCTCAGGGCAT
 A G T C A G T C A G T C A C G T A G C T C G T A A C T G A C T G G T C A A G T C A C G T A C G T
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CCCTTAGGAC-
TGCCCTGAGGGCA
 A C G T A C G T A G T C A G T C A G T C A C G T A G C T C G T A A C T G A C T G G T C A A G T C A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CCCTTAGGAC--
TCACCTCTGGGCAG
 A C G T A C G T A G T C A G T C A G T C A C G T A G C T C G T A A C T G A C T G G T C A A G T C A C G T A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CCCTTAGGAC-
TGCCCTGAGGGCA
 A C G T A C G T A G T C A G T C A G T C A C G T A G C T C G T A A C T G A C T G G T C A A G T C A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CCCTTAGGAC-
TCCCNNGGGACN
 A C G T A G T C A G T C A G T C A C G T A G C T C G T A A C T G A C T G G T C A A G T C A C G T
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CCCTTAGGAC-
TGCCCTGAGGGCA
 A C G T A C G T A G T C A G T C A G T C A C G T A G C T C G T A A C T G A C T G G T C A A G T C A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

PLAG1/MA0163.1/Jaspar

Match Rank:8
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CCCTTAGGAC--
CCCCCTTGGGCCCC
 A C G T A C G T A G T C A G T C A G T C A C G T A G C T C G T A A C T G A C T G G T C A A G T C A C G T A C G T
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C

EBF1/MA0154.3/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CCCTTAGGAC-
ATTCCCAAGGGAAT
 A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G C T C G T A A C T G A C T G G T C A A G T C A C G T
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCCTTAGGAC
BCMATTAG---
 A C G T A G T C A G T C A G T C A C G T A G C T C G T A A C T G A C T G G T C A A G T C
A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T A C G T A C G T