Information for 8-ACAGWWTCCWCAAAGA (Motif 9)

C G T A T G A C C G T A T A C G C G T A C G T A A C G T A G T C G A T C G C T A A T G C C T G A G T C A G T C A C A T G G C T A
Reverse Opposite:
C G A T G A T C A C G T A C G T A G C T T A C G C G A T C T A G T C A G C G T A G C A T G C A T A G T C G C A T A C T G A C G T
p-value:1e-11
log p-value:-2.672e+01
Information Content per bp:1.631
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.53%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.8 +/- 25.4bp
Average Position of motif in Background44.4 +/- 14.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.58
Offset:9
Orientation:reverse strand
Alignment:ACAGWWTCCWCAAAGA
---------ACAAAG-
 C G T A T G A C C G T A T A C G C G T A C G T A A C G T A G T C G A T C G C T A A T G C C T G A G T C A G T C A C A T G G C T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:2
Score:0.55
Offset:4
Orientation:forward strand
Alignment:ACAGWWTCCWCAAAGA--
----AAAGATCAAAGGAA
 C G T A T G A C C G T A T A C G C G T A C G T A A C G T A G T C G A T C G C T A A T G C C T G A G T C A G T C A C A T G G C T A A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

PB0082.1_Tcf3_1/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:ACAGWWTCCWCAAAGA----
---TATAGATCAAAGGAAAA
 C G T A T G A C C G T A T A C G C G T A C G T A A C G T A G T C G A T C G C T A A T G C C T G A G T C A G T C A C A T G G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.55
Offset:6
Orientation:forward strand
Alignment:ACAGWWTCCWCAAAGA
------ACATCAAAGG
 C G T A T G A C C G T A T A C G C G T A C G T A A C G T A G T C G A T C G C T A A T G C C T G A G T C A G T C A C A T G G C T A
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

PB0083.1_Tcf7_1/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:ACAGWWTCCWCAAAGA----
---TATAGATCAAAGGAAAA
 C G T A T G A C C G T A T A C G C G T A C G T A A C G T A G T C G A T C G C T A A T G C C T G A G T C A G T C A C A T G G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:ACAGWWTCCWCAAAGA----
---NNNAGATCAAAGGANNN
 C G T A T G A C C G T A T A C G C G T A C G T A A C G T A G T C G A T C G C T A A T G C C T G A G T C A G T C A C A T G G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:7
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:ACAGWWTCCWCAAAGA-----
---------ACAAAGGNBCCT
 C G T A T G A C C G T A T A C G C G T A C G T A A C G T A G T C G A T C G C T A A T G C C T G A G T C A G T C A C A T G G C T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:8
Score:0.52
Offset:6
Orientation:forward strand
Alignment:ACAGWWTCCWCAAAGA--
------ACATCAAAGGNA
 C G T A T G A C C G T A T A C G C G T A C G T A A C G T A G T C G A T C G C T A A T G C C T G A G T C A G T C A C A T G G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

PB0040.1_Lef1_1/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:ACAGWWTCCWCAAAGA----
---NANAGATCAAAGGGNNN
 C G T A T G A C C G T A T A C G C G T A C G T A A C G T A G T C G A T C G C T A A T G C C T G A G T C A G T C A C A T G G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

MEF2C/MA0497.1/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:ACAGWWTCCWCAAAGA---
----ATGCTAAAAATAGAA
 C G T A T G A C C G T A T A C G C G T A C G T A A C G T A G T C G A T C G C T A A T G C C T G A G T C A G T C A C A T G G C T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A