Information for 7-TGGCAAGTCTTCCACA (Motif 8)

C G A T A C T G A C T G A G T C C T G A C T G A C T A G A C G T A G T C A C G T C A G T A G T C A G T C C G T A A T G C C G T A
Reverse Opposite:
A C G T A T C G C G A T A C T G A C T G G T C A C G T A C T A G G T C A G A T C G A C T A G C T A C T G T G A C G T A C C G T A
p-value:1e-12
log p-value:-2.848e+01
Information Content per bp:1.766
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets29.4 +/- 7.9bp
Average Position of motif in Background26.0 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC2/MA0152.1/Jaspar

Match Rank:1
Score:0.58
Offset:7
Orientation:forward strand
Alignment:TGGCAAGTCTTCCACA
-------TTTTCCA--
 C G A T A C T G A C T G A G T C C T G A C T G A C T A G A C G T A G T C A C G T C A G T A G T C A G T C C G T A A T G C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TGGCAAGTCTTCCACA-
-----TGTCTGDCACCT
 C G A T A C T G A C T G A G T C C T G A C T G A C T A G A C G T A G T C A C G T C A G T A G T C A G T C C G T A A T G C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:3
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TGGCAAGTCTTCCACA-
NTGACTCANTTTTTCCANTN
 A C G T A C G T A C G T C G A T A C T G A C T G A G T C C T G A C T G A C T A G A C G T A G T C A C G T C A G T A G T C A G T C C G T A A T G C C G T A A C G T
T C G A G C A T A C T G C G T A A T G C G C A T G T A C C G T A A G C T G C A T A G C T A G C T G A C T A G C T A G T C A G T C G C T A A G C T G A C T A T G C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.54
Offset:7
Orientation:forward strand
Alignment:TGGCAAGTCTTCCACA---
-------NWAACCACADNN
 C G A T A C T G A C T G A G T C C T G A C T G A C T A G A C G T A G T C A C G T C A G T A G T C A G T C C G T A A T G C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

NFAT5/MA0606.1/Jaspar

Match Rank:5
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TGGCAAGTCTTCCACA
------ATTTTCCATT
 C G A T A C T G A C T G A G T C C T G A C T G A C T A G A C G T A G T C A C G T C A G T A G T C A G T C C G T A A T G C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

SPIB/MA0081.1/Jaspar

Match Rank:6
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:TGGCAAGTCTTCCACA
---------TTCCTCT
 C G A T A C T G A C T G A G T C C T G A C T G A C T A G A C G T A G T C A C G T C A G T A G T C A G T C C G T A A T G C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TGGCAAGTCTTCCACA-
----CTGTCTGTCACCT
 C G A T A C T G A C T G A G T C C T G A C T G A C T A G A C G T A G T C A C G T C A G T A G T C A G T C C G T A A T G C C G T A A C G T
A C G T A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGGCAAGTCTTCCACA
AAGGCAAGTGT------
 A C G T C G A T A C T G A C T G A G T C C T G A C T G A C T A G A C G T A G T C A C G T C A G T A G T C A G T C C G T A A T G C C G T A
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.53
Offset:6
Orientation:forward strand
Alignment:TGGCAAGTCTTCCACA
------ATTTTCCATT
 C G A T A C T G A C T G A G T C C T G A C T G A C T A G A C G T A G T C A C G T C A G T A G T C A G T C C G T A A T G C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:TGGCAAGTCTTCCACA--
--------ATGCCAGACN
 C G A T A C T G A C T G A G T C C T G A C T G A C T A G A C G T A G T C A C G T C A G T A G T C A G T C C G T A A T G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C