Information for 7-CAGGCCYTGGAGA (Motif 19)

A T G C G C T A C T A G A T C G A T G C A T G C A G T C A G C T A T C G A C T G C G T A A C T G C G T A
Reverse Opposite:
G C A T A G T C A C G T T G A C A T G C C T G A T C A G T A C G A T C G A T G C A G T C C A G T A T C G
p-value:1e-8
log p-value:-2.014e+01
Information Content per bp:1.718
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif2.81%
Number of Background Sequences with motif97.3
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets45.0 +/- 21.7bp
Average Position of motif in Background52.6 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CAGGCCYTGGAGA
------GTGGAT-
 A T G C G C T A C T A G A T C G A T G C A T G C A G T C A G C T A T C G A C T G C G T A A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:2
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:CAGGCCYTGGAGA-
-------TGGAAAA
 A T G C G C T A C T A G A T C G A T G C A T G C A G T C A G C T A T C G A C T G C G T A A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:CAGGCCYTGGAGA
-------CGGAGC
 A T G C G C T A C T A G A T C G A T G C A T G C A G T C A G C T A T C G A C T G C G T A A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CAGGCCYTGGAGA---
------CTYRAGTGSY
 A T G C G C T A C T A G A T C G A T G C A T G C A G T C A G C T A T C G A C T G C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:5
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CAGGCCYTGGAGA------
--CTACTTGGATACGGAAT
 A T G C G C T A C T A G A T C G A T G C A T G C A G T C A G C T A T C G A C T G C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CAGGCCYTGGAGA---
------BTBRAGTGSN
 A T G C G C T A C T A G A T C G A T G C A T G C A G T C A G C T A T C G A C T G C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CAGGCCYTGGAGA-
--GRTGMTRGAGCC
 A T G C G C T A C T A G A T C G A T G C A T G C A G T C A G C T A T C G A C T G C G T A A C T G C G T A A C G T
A C G T A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:CAGGCCYTGGAGA
-------NGAAGC
 A T G C G C T A C T A G A T C G A T G C A T G C A G T C A G C T A T C G A C T G C G T A A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CAGGCCYTGGAGA
-TGACCTTGAN--
 A T G C G C T A C T A G A T C G A T G C A T G C A G T C A G C T A T C G A C T G C G T A A C T G C G T A
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:10
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CAGGCCYTGGAGA
GGGGCTYGKCTGGGA--
 A C G T A C G T A C G T A C G T A T G C G C T A C T A G A T C G A T G C A T G C A G T C A G C T A T C G A C T G C G T A A C T G C G T A
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T A C G T