Information for 4-CTACRYCACAATG (Motif 12)

A G T C A G C T G C T A G T A C T C G A A G T C G T A C C T G A A T G C G T C A C T G A C G A T C T A G
Reverse Opposite:
A G T C G C T A A G C T A C G T A T C G A G C T A C T G C T A G A G C T A C T G C A G T C T G A A C T G
p-value:1e-9
log p-value:-2.213e+01
Information Content per bp:1.735
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.0 +/- 27.7bp
Average Position of motif in Background66.2 +/- 2.4bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.67
Offset:7
Orientation:reverse strand
Alignment:CTACRYCACAATG
-------ACAAAG
 A G T C A G C T G C T A G T A C T C G A A G T C G T A C C T G A A T G C G T C A C T G A C G A T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:2
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CTACRYCACAATG-
----VRRACAAWGG
 A G T C A G C T G C T A G T A C T C G A A G T C G T A C C T G A A T G C G T C A C T G A C G A T C T A G A C G T
A C G T A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

Sox17/MA0078.1/Jaspar

Match Rank:3
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:CTACRYCACAATG--
------GACAATGNN
 A G T C A G C T G C T A G T A C T C G A A G T C G T A C C T G A A T G C G T C A C T G A C G A T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:4
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CTACRYCACAATG-
----RNAACAATGG
 A G T C A G C T G C T A G T A C T C G A A G T C G T A C C T G A A T G C G T C A C T G A C G A T C T A G A C G T
A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:CTACRYCACAATG-
------RACAAWGG
 A G T C A G C T G C T A G T A C T C G A A G T C G T A C C T G A A T G C G T C A C T G A C G A T C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:CTACRYCACAATG------
-------ACAAAGGNBCCT
 A G T C A G C T G C T A G T A C T C G A A G T C G T A C C T G A A T G C G T C A C T G A C G A T C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Sox2/MA0143.3/Jaspar

Match Rank:7
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:CTACRYCACAATG-
------AACAAAGG
 A G T C A G C T G C T A G T A C T C G A A G T C G T A C C T G A A T G C G T C A C T G A C G A T C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTACRYCACAATG
-NWAACCACADNN
 A G T C A G C T G C T A G T A C T C G A A G T C G T A C C T G A A T G C G T C A C T G A C G A T C T A G
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CTACRYCACAATG-
----VRAACAATGG
 A G T C A G C T G C T A G T A C T C G A A G T C G T A C C T G A A T G C G T C A C T G A C G A T C T A G A C G T
A C G T A C G T A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTACRYCACAATG
--AAACCACAGAN
 A G T C A G C T G C T A G T A C T C G A A G T C G T A C C T G A A T G C G T C A C T G A C G A T C T A G
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C