Information for 2-AAGATATAWTCCT (Motif 10)

C G T A C G T A T A C G C G T A A C G T C G T A A C G T C G T A C G A T A C G T A G T C A G T C A C G T
Reverse Opposite:
T C G A A C T G A C T G C G T A C G A T C G A T C G T A A C G T C G T A A C G T A G T C A C G T A C G T
p-value:1e-10
log p-value:-2.502e+01
Information Content per bp:1.862
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.2 +/- 22.3bp
Average Position of motif in Background45.9 +/- 19.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0124.1_Obox5_1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AAGATATAWTCCT----
NANANTTAATCCCNNNN
 C G T A C G T A T A C G C G T A A C G T C G T A A C G T C G T A C G A T A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A

PH0125.1_Obox5_2/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AAGATATAWTCCT----
GATAATTAATCCCTCTT
 C G T A C G T A T A C G C G T A A C G T C G T A A C G T C G T A C G A T A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T

OLIG1/MA0826.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAGATATAWTCCT
AACATATGTT---
 C G T A C G T A T A C G C G T A A C G T C G T A A C G T C G T A C G A T A C G T A G T C A G T C A C G T
T C G A T G C A G T A C C T G A A C G T T G C A G C A T A C T G A C G T G A C T A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:4
Score:0.62
Offset:5
Orientation:forward strand
Alignment:AAGATATAWTCCT
-----TTAATCCT
 C G T A C G T A T A C G C G T A A C G T C G T A A C G T C G T A C G A T A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AAGATATAWTCCT
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A C G T C G T A C G T A T A C G C G T A A C G T C G T A A C G T C G T A C G A T A C G T A G T C A G T C A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

BHLHE23/MA0817.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAGATATAWTCCT
AAACATATGTTT--
 A C G T C G T A C G T A T A C G C G T A A C G T C G T A A C G T C G T A C G A T A C G T A G T C A G T C A C G T
C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:7
Score:0.60
Offset:5
Orientation:forward strand
Alignment:AAGATATAWTCCT
-----TTAATCCG
 C G T A C G T A T A C G C G T A A C G T C G T A A C G T C G T A C G A T A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AAGATATAWTCCT
AAGGATATNTN---
 A C G T C G T A C G T A T A C G C G T A A C G T C G T A A C G T C G T A C G A T A C G T A G T C A G T C A C G T
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:9
Score:0.60
Offset:5
Orientation:forward strand
Alignment:AAGATATAWTCCT
-----TTAATCCC
 C G T A C G T A T A C G C G T A A C G T C G T A A C G T C G T A C G A T A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----AAGATATAWTCCT--
NNNNNBAGATAWYATCTVHN
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A T A C G C G T A A C G T C G T A A C G T C G T A C G A T A C G T A G T C A G T C A C G T A C G T A C G T
C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T