Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-87 | -2.022e+02 | 0.0000 | 166.0 | 19.30% | 1290.2 | 2.66% | motif file (matrix) |
svg |
2 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-85 | -1.980e+02 | 0.0000 | 177.0 | 20.58% | 1548.2 | 3.19% | motif file (matrix) |
svg |
3 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-85 | -1.974e+02 | 0.0000 | 177.0 | 20.58% | 1554.6 | 3.20% | motif file (matrix) |
svg |
4 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-85 | -1.966e+02 | 0.0000 | 128.0 | 14.88% | 688.8 | 1.42% | motif file (matrix) |
svg |
5 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-84 | -1.934e+02 | 0.0000 | 149.0 | 17.33% | 1050.6 | 2.17% | motif file (matrix) |
svg |
6 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-83 | -1.913e+02 | 0.0000 | 161.0 | 18.72% | 1292.0 | 2.66% | motif file (matrix) |
svg |
7 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-77 | -1.794e+02 | 0.0000 | 176.0 | 20.47% | 1725.7 | 3.56% | motif file (matrix) |
svg |
8 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-68 | -1.586e+02 | 0.0000 | 99.0 | 11.51% | 490.8 | 1.01% | motif file (matrix) |
svg |
9 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-34 | -7.991e+01 | 0.0000 | 43.0 | 5.00% | 162.1 | 0.33% | motif file (matrix) |
svg |
10 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-27 | -6.404e+01 | 0.0000 | 54.0 | 6.28% | 424.8 | 0.88% | motif file (matrix) |
svg |
11 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-20 | -4.745e+01 | 0.0000 | 35.0 | 4.07% | 230.5 | 0.48% | motif file (matrix) |
svg |
12 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-15 | -3.587e+01 | 0.0000 | 82.0 | 9.53% | 1659.5 | 3.42% | motif file (matrix) |
svg |
13 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-14 | -3.313e+01 | 0.0000 | 18.0 | 2.09% | 73.3 | 0.15% | motif file (matrix) |
svg |
14 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-14 | -3.282e+01 | 0.0000 | 87.0 | 10.12% | 1929.2 | 3.98% | motif file (matrix) |
svg |
15 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-13 | -3.157e+01 | 0.0000 | 19.0 | 2.21% | 93.8 | 0.19% | motif file (matrix) |
svg |
16 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-13 | -3.101e+01 | 0.0000 | 20.0 | 2.33% | 110.1 | 0.23% | motif file (matrix) |
svg |
17 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-13 | -3.032e+01 | 0.0000 | 34.0 | 3.95% | 385.7 | 0.79% | motif file (matrix) |
svg |
18 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-9 | -2.251e+01 | 0.0000 | 88.0 | 10.23% | 2390.4 | 4.93% | motif file (matrix) |
svg |
19 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-9 | -2.145e+01 | 0.0000 | 53.0 | 6.16% | 1138.8 | 2.35% | motif file (matrix) |
svg |
20 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-9 | -2.137e+01 | 0.0000 | 101.0 | 11.74% | 2974.1 | 6.13% | motif file (matrix) |
svg |
21 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-8 | -2.040e+01 | 0.0000 | 39.0 | 4.53% | 712.3 | 1.47% | motif file (matrix) |
svg |
22 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-8 | -2.039e+01 | 0.0000 | 37.0 | 4.30% | 652.0 | 1.34% | motif file (matrix) |
svg |
23 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-8 | -1.908e+01 | 0.0000 | 74.0 | 8.60% | 2009.4 | 4.14% | motif file (matrix) |
svg |
24 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-7 | -1.802e+01 | 0.0000 | 37.0 | 4.30% | 714.0 | 1.47% | motif file (matrix) |
svg |
25 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-7 | -1.801e+01 | 0.0000 | 85.0 | 9.88% | 2507.1 | 5.17% | motif file (matrix) |
svg |
26 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-7 | -1.625e+01 | 0.0000 | 57.0 | 6.63% | 1487.0 | 3.06% | motif file (matrix) |
svg |
27 |
| NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer | 1e-6 | -1.527e+01 | 0.0000 | 45.0 | 5.23% | 1082.0 | 2.23% | motif file (matrix) |
svg |
28 |
| NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-6 | -1.491e+01 | 0.0000 | 12.0 | 1.40% | 99.5 | 0.21% | motif file (matrix) |
svg |
29 |
| AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer | 1e-6 | -1.398e+01 | 0.0000 | 53.0 | 6.16% | 1440.4 | 2.97% | motif file (matrix) |
svg |
30 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-5 | -1.342e+01 | 0.0000 | 39.0 | 4.53% | 937.4 | 1.93% | motif file (matrix) |
svg |
31 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-5 | -1.322e+01 | 0.0000 | 31.0 | 3.60% | 664.0 | 1.37% | motif file (matrix) |
svg |
32 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-5 | -1.264e+01 | 0.0000 | 60.0 | 6.98% | 1793.7 | 3.70% | motif file (matrix) |
svg |
33 |
| AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer | 1e-5 | -1.232e+01 | 0.0000 | 64.0 | 7.44% | 1979.1 | 4.08% | motif file (matrix) |
svg |
34 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-5 | -1.164e+01 | 0.0001 | 113.0 | 13.14% | 4218.3 | 8.69% | motif file (matrix) |
svg |
35 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-4 | -1.133e+01 | 0.0001 | 67.0 | 7.79% | 2172.1 | 4.48% | motif file (matrix) |
svg |
36 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-4 | -1.120e+01 | 0.0001 | 37.0 | 4.30% | 957.5 | 1.97% | motif file (matrix) |
svg |
37 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-4 | -1.082e+01 | 0.0002 | 60.0 | 6.98% | 1908.4 | 3.93% | motif file (matrix) |
svg |
38 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-4 | -1.075e+01 | 0.0002 | 73.0 | 8.49% | 2476.5 | 5.10% | motif file (matrix) |
svg |
39 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.074e+01 | 0.0002 | 49.0 | 5.70% | 1454.8 | 3.00% | motif file (matrix) |
svg |
40 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-4 | -1.032e+01 | 0.0003 | 20.0 | 2.33% | 389.1 | 0.80% | motif file (matrix) |
svg |
41 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-4 | -9.735e+00 | 0.0005 | 50.0 | 5.81% | 1557.3 | 3.21% | motif file (matrix) |
svg |
42 |
| NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer | 1e-4 | -9.735e+00 | 0.0005 | 11.0 | 1.28% | 141.9 | 0.29% | motif file (matrix) |
svg |
43 |
| c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-4 | -9.347e+00 | 0.0007 | 25.0 | 2.91% | 592.4 | 1.22% | motif file (matrix) |
svg |
44 |
| EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer | 1e-3 | -8.914e+00 | 0.0011 | 16.0 | 1.86% | 301.9 | 0.62% | motif file (matrix) |
svg |
45 |
| HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-3 | -8.868e+00 | 0.0011 | 50.0 | 5.81% | 1615.8 | 3.33% | motif file (matrix) |
svg |
46 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-3 | -8.407e+00 | 0.0018 | 63.0 | 7.33% | 2221.7 | 4.58% | motif file (matrix) |
svg |
47 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-3 | -8.101e+00 | 0.0023 | 40.0 | 4.65% | 1243.9 | 2.56% | motif file (matrix) |
svg |
48 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-3 | -8.060e+00 | 0.0024 | 35.0 | 4.07% | 1039.7 | 2.14% | motif file (matrix) |
svg |
49 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-3 | -7.959e+00 | 0.0026 | 25.0 | 2.91% | 650.4 | 1.34% | motif file (matrix) |
svg |
50 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-3 | -7.890e+00 | 0.0027 | 111.0 | 12.91% | 4535.5 | 9.35% | motif file (matrix) |
svg |
51 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-3 | -7.632e+00 | 0.0035 | 55.0 | 6.40% | 1928.3 | 3.97% | motif file (matrix) |
svg |
52 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-3 | -7.538e+00 | 0.0037 | 137.0 | 15.93% | 5869.0 | 12.10% | motif file (matrix) |
svg |
53 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-3 | -7.485e+00 | 0.0039 | 13.0 | 1.51% | 245.1 | 0.51% | motif file (matrix) |
svg |
54 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-3 | -7.320e+00 | 0.0045 | 58.0 | 6.74% | 2090.1 | 4.31% | motif file (matrix) |
svg |
55 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-3 | -7.311e+00 | 0.0045 | 39.0 | 4.53% | 1253.4 | 2.58% | motif file (matrix) |
svg |
56 |
| JunD(bZIP)/K562-JunD-ChIP-Seq/Homer | 1e-3 | -7.310e+00 | 0.0045 | 11.0 | 1.28% | 188.5 | 0.39% | motif file (matrix) |
svg |
57 |
| Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer | 1e-3 | -7.156e+00 | 0.0050 | 21.0 | 2.44% | 535.5 | 1.10% | motif file (matrix) |
svg |
58 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-3 | -7.107e+00 | 0.0051 | 49.0 | 5.70% | 1704.7 | 3.51% | motif file (matrix) |
svg |
59 |
| Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer | 1e-3 | -7.055e+00 | 0.0053 | 12.0 | 1.40% | 225.2 | 0.46% | motif file (matrix) |
svg |
60 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-3 | -7.024e+00 | 0.0054 | 71.0 | 8.26% | 2719.1 | 5.60% | motif file (matrix) |
svg |
61 |
| Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer | 1e-3 | -6.957e+00 | 0.0057 | 259.0 | 30.12% | 12310.2 | 25.37% | motif file (matrix) |
svg |
62 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-2 | -6.866e+00 | 0.0061 | 22.0 | 2.56% | 586.4 | 1.21% | motif file (matrix) |
svg |
63 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-2 | -6.372e+00 | 0.0099 | 53.0 | 6.16% | 1949.5 | 4.02% | motif file (matrix) |
svg |
64 |
| HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.348e+00 | 0.0100 | 12.0 | 1.40% | 246.0 | 0.51% | motif file (matrix) |
svg |
65 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.237e+00 | 0.0110 | 33.0 | 3.84% | 1071.5 | 2.21% | motif file (matrix) |
svg |
66 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-2 | -6.195e+00 | 0.0112 | 84.0 | 9.77% | 3436.9 | 7.08% | motif file (matrix) |
svg |
67 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-2 | -6.195e+00 | 0.0112 | 41.0 | 4.77% | 1423.0 | 2.93% | motif file (matrix) |
svg |
68 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -6.185e+00 | 0.0112 | 89.0 | 10.35% | 3681.0 | 7.59% | motif file (matrix) |
svg |
69 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-2 | -5.948e+00 | 0.0138 | 36.0 | 4.19% | 1222.5 | 2.52% | motif file (matrix) |
svg |
70 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.851e+00 | 0.0150 | 106.0 | 12.33% | 4569.5 | 9.42% | motif file (matrix) |
svg |
71 |
| HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer | 1e-2 | -5.832e+00 | 0.0150 | 16.0 | 1.86% | 405.9 | 0.84% | motif file (matrix) |
svg |
72 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.790e+00 | 0.0155 | 72.0 | 8.37% | 2906.9 | 5.99% | motif file (matrix) |
svg |
73 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-2 | -5.725e+00 | 0.0163 | 47.0 | 5.47% | 1735.9 | 3.58% | motif file (matrix) |
svg |
74 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-2 | -5.655e+00 | 0.0172 | 55.0 | 6.40% | 2113.9 | 4.36% | motif file (matrix) |
svg |
75 |
| ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.649e+00 | 0.0172 | 70.0 | 8.14% | 2827.6 | 5.83% | motif file (matrix) |
svg |
76 |
| MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer | 1e-2 | -5.443e+00 | 0.0207 | 46.0 | 5.35% | 1716.1 | 3.54% | motif file (matrix) |
svg |
77 |
| E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.351e+00 | 0.0224 | 23.0 | 2.67% | 707.9 | 1.46% | motif file (matrix) |
svg |
78 |
| MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer | 1e-2 | -5.283e+00 | 0.0237 | 24.0 | 2.79% | 753.3 | 1.55% | motif file (matrix) |
svg |
79 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-2 | -5.283e+00 | 0.0237 | 54.0 | 6.28% | 2106.1 | 4.34% | motif file (matrix) |
svg |
80 |
| Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer | 1e-2 | -5.242e+00 | 0.0241 | 36.0 | 4.19% | 1280.0 | 2.64% | motif file (matrix) |
svg |
81 |
| GFY(?)/Promoter/Homer | 1e-2 | -5.172e+00 | 0.0255 | 7.0 | 0.81% | 118.1 | 0.24% | motif file (matrix) |
svg |
82 |
| CRE(bZIP)/Promoter/Homer | 1e-2 | -5.166e+00 | 0.0255 | 16.0 | 1.86% | 435.9 | 0.90% | motif file (matrix) |
svg |
83 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-2 | -5.084e+00 | 0.0272 | 202.0 | 23.49% | 9685.5 | 19.96% | motif file (matrix) |
svg |
84 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-2 | -5.061e+00 | 0.0275 | 30.0 | 3.49% | 1027.7 | 2.12% | motif file (matrix) |
svg |
85 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-2 | -4.923e+00 | 0.0312 | 66.0 | 7.67% | 2725.5 | 5.62% | motif file (matrix) |
svg |
86 |
| Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer | 1e-2 | -4.873e+00 | 0.0324 | 7.0 | 0.81% | 125.3 | 0.26% | motif file (matrix) |
svg |
87 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-2 | -4.864e+00 | 0.0324 | 42.0 | 4.88% | 1588.8 | 3.27% | motif file (matrix) |
svg |
88 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-2 | -4.718e+00 | 0.0369 | 20.0 | 2.33% | 621.9 | 1.28% | motif file (matrix) |
svg |