Information for 13-AGAATGACCA (Motif 24)

C G T A A C T G T C G A G T C A A C G T A T C G G T C A A G T C A G T C C G T A
Reverse Opposite:
C G A T A C T G A C T G A C G T T A G C C G T A A C G T A G C T A G T C A C G T
p-value:1e-8
log p-value:-1.854e+01
Information Content per bp:1.840
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.63%
Number of Background Sequences with motif103.3
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets57.5 +/- 19.1bp
Average Position of motif in Background52.5 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:1
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:AGAATGACCA
----TGACCT
 C G T A A C T G T C G A G T C A A C G T A T C G G T C A A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:AGAATGACCA
--CATGAC--
 C G T A A C T G T C G A G T C A A C G T A T C G G T C A A G T C A G T C C G T A
A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:3
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:AGAATGACCA--
----TGACCYCT
 C G T A A C T G T C G A G T C A A C G T A T C G G T C A A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:AGAATGACCA--
----TGACCTYA
 C G T A A C T G T C G A G T C A A C G T A T C G G T C A A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

RORA/MA0071.1/Jaspar

Match Rank:5
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:AGAATGACCA----
----TGACCTTGAT
 C G T A A C T G T C G A G T C A A C G T A T C G G T C A A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

ESR2/MA0258.2/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----AGAATGACCA
AGGNCANNGTGACCT
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G T C G A G T C A A C G T A T C G G T C A A G T C A G T C C G T A
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AGAATGACCA---
---ATGACCTTGA
 C G T A A C T G T C G A G T C A A C G T A T C G G T C A A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AGAATGACCA-
GGTCANNGTGACCTN
 A C G T A C G T A C G T A C G T C G T A A C T G T C G A G T C A A C G T A T C G G T C A A G T C A G T C C G T A A C G T
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AGAATGACCA---
---NTGACCTTGA
 C G T A A C T G T C G A G T C A A C G T A T C G G T C A A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

Esrra/MA0592.2/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AGAATGACCA----
---ATGACCTTGAA
 C G T A A C T G T C G A G T C A A C G T A T C G G T C A A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A