Information for 13-VBACATGGCTGGC (Motif 18)

T C A G A G T C C G T A A G T C G T C A C G A T A C T G A C T G A G T C A C G T A C T G C A T G A G T C
Reverse Opposite:
A C T G G A T C A G T C C G T A A C T G A G T C A G T C C G T A C A G T A C T G A C G T T A C G A G T C
p-value:1e-9
log p-value:-2.235e+01
Information Content per bp:1.849
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif8.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets61.0 +/- 20.2bp
Average Position of motif in Background62.3 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.62
Offset:4
Orientation:forward strand
Alignment:VBACATGGCTGGC
----TWGTCTGV-
 T C A G A G T C C G T A A G T C G T C A C G A T A C T G A C T G A G T C A C G T A C T G C A T G A G T C
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:VBACATGGCTGGC-----
--NGTAGGTTGGCATNNN
 T C A G A G T C C G T A A G T C G T C A C G A T A C T G A C T G A G T C A C G T A C T G C A T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:VBACATGGCTGGC--
------GGTTGGCAT
 T C A G A G T C C G T A A G T C G T C A C G A T A C T G A C T G A G T C A C G T A C T G C A T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:VBACATGGCTGGC
------NGCTN--
 T C A G A G T C C G T A A G T C G T C A C G A T A C T G A C T G A G T C A C G T A C T G C A T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:VBACATGGCTGGC---
-------NTTGGCANN
 T C A G A G T C C G T A A G T C G T C A C G A T A C T G A C T G A G T C A C G T A C T G C A T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:VBACATGGCTGGC----
NNTNNTGTCTGGNNTNG
 T C A G A G T C C G T A A G T C G T C A C G A T A C T G A C T G A G T C A C G T A C T G C A T G A G T C A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Myc/MA0147.2/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--VBACATGGCTGGC
AAGCACATGG-----
 A C G T A C G T T C A G A G T C C G T A A G T C G T C A C G A T A C T G A C T G A G T C A C G T A C T G C A T G A G T C
T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.58
Offset:8
Orientation:forward strand
Alignment:VBACATGGCTGGC-
--------TTGGCA
 T C A G A G T C C G T A A G T C G T C A C G A T A C T G A C T G A G T C A C G T A C T G C A T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:VBACATGGCTGGC---
-GTCATGCHTGRCTGS
 T C A G A G T C C G T A A G T C G T C A C G A T A C T G A C T G A G T C A C G T A C T G C A T G A G T C A C G T A C G T A C G T
A C G T A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.58
Offset:4
Orientation:forward strand
Alignment:VBACATGGCTGGC
----CTGTCTGG-
 T C A G A G T C C G T A A G T C G T C A C G A T A C T G A C T G A G T C A C G T A C T G C A T G A G T C
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T