Information for 6-AGGGCAGGCCTCAGAG (Motif 14)

C G T A A C T G C T A G A C T G A G T C C G T A A C T G A T C G G T A C G T A C A G C T A G T C C G T A A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A C G T A C T G C T G A A C T G A C T G A T G C A G T C C G A T A C T G A G T C G A T C A G T C A C G T
p-value:1e-10
log p-value:-2.498e+01
Information Content per bp:1.915
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.2 +/- 28.8bp
Average Position of motif in Background62.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AGGGCAGGCCTCAGAG--
----CAGGCCNNGGCCNN
 C G T A A C T G C T A G A C T G A G T C C G T A A C T G A T C G G T A C G T A C A G C T A G T C C G T A A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AGGGCAGGCCTCAGAG
---CNAGGCCT-----
 C G T A A C T G C T A G A C T G A G T C C G T A A C T G A T C G G T A C G T A C A G C T A G T C C G T A A C T G C G T A A C T G
A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AGGGCAGGCCTCAGAG
TNNGGGCAG---------
 A C G T A C G T C G T A A C T G C T A G A C T G A G T C C G T A A C T G A T C G G T A C G T A C A G C T A G T C C G T A A C T G C G T A A C T G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AGGGCAGGCCTCAGAG
---CTAGGCCT-----
 C G T A A C T G C T A G A C T G A G T C C G T A A C T G A T C G G T A C G T A C A G C T A G T C C G T A A C T G C G T A A C T G
A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:AGGGCAGGCCTCAGAG---
-------GCCTCAGGGCAT
 C G T A A C T G C T A G A C T G A G T C C G T A A C T G A T C G G T A C G T A C A G C T A G T C C G T A A C T G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---AGGGCAGGCCTCAGAG
CAAAGGTCAG---------
 A C G T A C G T A C G T C G T A A C T G C T A G A C T G A G T C C G T A A C T G A T C G G T A C G T A C A G C T A G T C C G T A A C T G C G T A A C T G
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:7
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-AGGGCAGGCCTCAGAG
NNGGCCACGCCTTTN--
 A C G T C G T A A C T G C T A G A C T G A G T C C G T A A C T G A T C G G T A C G T A C A G C T A G T C C G T A A C T G C G T A A C T G
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-AGGGCAGGCCTCAGAG
TAGGGCAAAGGTCA---
 A C G T C G T A A C T G C T A G A C T G A G T C C G T A A C T G A T C G G T A C G T A C A G C T A G T C C G T A A C T G C G T A A C T G
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T A C G T

PB0094.1_Zfp128_1/Jaspar

Match Rank:9
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--AGGGCAGGCCTCAGAG
TTNGGGTACGCCNNANN-
 A C G T A C G T C G T A A C T G C T A G A C T G A G T C C G T A A C T G A T C G G T A C G T A C A G C T A G T C C G T A A C T G C G T A A C T G
G A C T C A G T C T G A T C A G A T C G A C T G A C G T C G T A A G T C C T A G G A T C G T A C G T C A G T C A C G T A C T A G T G C A A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--AGGGCAGGCCTCAGAG
TRAGGTCA----------
 A C G T A C G T C G T A A C T G C T A G A C T G A G T C C G T A A C T G A T C G G T A C G T A C A G C T A G T C C G T A A C T G C G T A A C T G
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T