Information for 7-GGTCATGGCTGAGGAA (Motif 9)

C T A G A T C G A C G T A G T C C T G A C A G T A C T G A C T G A G T C A C G T T A C G G C T A A C T G A C T G C G T A C G T A
Reverse Opposite:
C G A T A C G T A G T C A G T C C A G T A G T C C G T A C T A G A G T C A G T C G C T A A G C T A C T G C G T A A T G C A G T C
p-value:1e-13
log p-value:-3.081e+01
Information Content per bp:1.806
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.3 +/- 27.0bp
Average Position of motif in Background55.7 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)-2.6
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIB/MA0081.1/Jaspar

Match Rank:1
Score:0.57
Offset:9
Orientation:forward strand
Alignment:GGTCATGGCTGAGGAA
---------AGAGGAA
 C T A G A T C G A C G T A G T C C T G A C A G T A C T G A C T G A G T C A C G T T A C G G C T A A C T G A C T G C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGTCATGGCTGAGGAA
AGGTCAAGGTCA-----
 A C G T C T A G A T C G A C G T A G T C C T G A C A G T A C T G A C T G A G T C A C G T T A C G G C T A A C T G A C T G C G T A C G T A
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGTCATGGCTGAGGAA
AGGTCAAGGTCA-----
 A C G T C T A G A T C G A C G T A G T C C T G A C A G T A C T G A C T G A G T C A C G T T A C G G C T A A C T G A C T G C G T A C G T A
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T A C G T A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:4
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:GGTCATGGCTGAGGAA----
--------NDCAGGAARTNN
 C T A G A T C G A C G T A G T C C T G A C A G T A C T G A C T G A G T C A C G T T A C G G C T A A C T G A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

Pax2/MA0067.1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GGTCATGGCTGAGGAA
AGTCACGC--------
 C T A G A T C G A C G T A G T C C T G A C A G T A C T G A C T G A G T C A C G T T A C G G C T A A C T G A C T G C G T A C G T A
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GGTCATGGCTGAGGAA
-GTCACGCTCNCTGA-
 C T A G A T C G A C G T A G T C C T G A C A G T A C T G A C T G A G T C A C G T T A C G G C T A A C T G A C T G C G T A C G T A
A C G T A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A A C G T

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:GGTCATGGCTGAGGAA---
---------DCCGGAARYN
 C T A G A T C G A C G T A G T C C T G A C A G T A C T G A C T G A G T C A C G T T A C G G C T A A C T G A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A G C T G A C T A C G C T A G G T C A G C T A T C A G G A C T T C A G

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GGTCATGGCTGAGGAA
-GTCATN---------
 C T A G A T C G A C G T A G T C C T G A C A G T A C T G A C T G A G T C A C G T T A C G G C T A A C T G A C T G C G T A C G T A
A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.51
Offset:9
Orientation:reverse strand
Alignment:GGTCATGGCTGAGGAA---
---------NNTGGAAANN
 C T A G A T C G A C G T A G T C C T G A C A G T A C T G A C T G A G T C A C G T T A C G G C T A A C T G A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GGTCATGGCTGAGGAA
AGGTCA-----------
 A C G T C T A G A T C G A C G T A G T C C T G A C A G T A C T G A C T G A G T C A C G T T A C G G C T A A C T G A C T G C G T A C G T A
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T