Information for 13-HTGGGAATTCCCC (Motif 26)

G C T A A C G T A C T G C A T G T C A G G T C A C G T A C G A T A C G T A G T C A T G C A G T C G T A C
Reverse Opposite:
C A T G A C T G A T C G C T A G C G T A G C T A G C A T A C G T A G T C G T A C G T A C G T C A C G A T
p-value:1e-6
log p-value:-1.477e+01
Information Content per bp:1.674
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif15.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets40.9 +/- 16.9bp
Average Position of motif in Background48.4 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:1
Score:0.88
Offset:2
Orientation:reverse strand
Alignment:HTGGGAATTCCCC-
--GGGAAATCCCCN
 G C T A A C G T A C T G C A T G T C A G G T C A C G T A C G A T A C G T A G T C A T G C A G T C G T A C A C G T
A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.83
Offset:2
Orientation:forward strand
Alignment:HTGGGAATTCCCC
--GGAAATTCCC-
 G C T A A C G T A C T G C A T G T C A G G T C A C G T A C G A T A C G T A G T C A T G C A G T C G T A C
A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:3
Score:0.82
Offset:2
Orientation:reverse strand
Alignment:HTGGGAATTCCCC-
--GGGGATTCCCCC
 G C T A A C G T A C T G C A T G T C A G G T C A C G T A C G A T A C G T A G T C A T G C A G T C G T A C A C G T
A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

NFKB2/MA0778.1/Jaspar

Match Rank:4
Score:0.81
Offset:1
Orientation:forward strand
Alignment:HTGGGAATTCCCC-
-AGGGGATTCCCCT
 G C T A A C G T A C T G C A T G T C A G G T C A C G T A C G A T A C G T A G T C A T G C A G T C G T A C A C G T
A C G T T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.80
Offset:2
Orientation:reverse strand
Alignment:HTGGGAATTCCCC
--GGAAATTCCC-
 G C T A A C G T A C T G C A T G T C A G G T C A C G T A C G A T A C G T A G T C A T G C A G T C G T A C
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:6
Score:0.79
Offset:2
Orientation:forward strand
Alignment:HTGGGAATTCCCC
--GGGGATTTCC-
 G C T A A C G T A C T G C A T G T C A G G T C A C G T A C G A T A C G T A G T C A T G C A G T C G T A C
A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.79
Offset:1
Orientation:forward strand
Alignment:HTGGGAATTCCCC
-GGGGATTTCC--
 G C T A A C G T A C T G C A T G T C A G G T C A C G T A C G A T A C G T A G T C A T G C A G T C G T A C
A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:8
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:HTGGGAATTCCCC-
-AGGGGATTCCCCT
 G C T A A C G T A C T G C A T G T C A G G T C A C G T A C G A T A C G T A G T C A T G C A G T C G T A C A C G T
A C G T T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.64
Offset:8
Orientation:reverse strand
Alignment:HTGGGAATTCCCC-
--------TCCCCA
 G C T A A C G T A C T G C A T G T C A G G T C A C G T A C G A T A C G T A G T C A T G C A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:10
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:HTGGGAATTCCCC-
----RCATTCCWGG
 G C T A A C G T A C T G C A T G T C A G G T C A C G T A C G A T A C G T A G T C A T G C A G T C G T A C A C G T
A C G T A C G T A C G T A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G