Information for 12-GAAACTCGAGTTT (Motif 25)

T A C G C G T A C G T A G C T A A G T C A C G T T G A C A C T G C G T A A C T G A C G T G A C T A C G T
Reverse Opposite:
C G T A C G T A C G T A A G T C C G A T T G A C A C T G C G T A A C T G C A G T G A C T A C G T A T G C
p-value:1e-6
log p-value:-1.517e+01
Information Content per bp:1.776
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif14.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets52.5 +/- 17.0bp
Average Position of motif in Background53.0 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0034.1_Irf4_1/Jaspar

Match Rank:1
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GAAACTCGAGTTT
CGTATCGAAACCAAA----
 A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C G T A G C T A A G T C A C G T T G A C A C T G C G T A A C T G A C G T G A C T A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A A C G T A C G T A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAAACTCGAGTTT
GWAAYHTGAKMC-
 T A C G C G T A C G T A G C T A A G T C A C G T T G A C A C T G C G T A A C T G A C G T G A C T A C G T
C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C A C G T

PB0036.1_Irf6_1/Jaspar

Match Rank:3
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------GAAACTCGAGTTT
CTGATCGAAACCAAAGT--
 A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C G T A G C T A A G T C A C G T T G A C A C T G C G T A A C T G A C G T G A C T A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GAAACTCGAGTTT
ACTGAAACCA------
 A C G T A C G T A C G T T A C G C G T A C G T A G C T A A G T C A C G T T G A C A C T G C G T A A C T G A C G T G A C T A C G T
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0035.1_Irf5_1/Jaspar

Match Rank:5
Score:0.53
Offset:-7
Orientation:forward strand
Alignment:-------GAAACTCGAGTTT
ATAAACCGAAACCAA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C G T A G C T A A G T C A C G T T G A C A C T G C G T A A C T G A C G T G A C T A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A A C G T A C G T A C G T A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GAAACTCGAGTTT
AGAAACGAAAGT--
 A C G T T A C G C G T A C G T A G C T A A G T C A C G T T G A C A C T G C G T A A C T G A C G T G A C T A C G T
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GAAACTCGAGTTT
RSCACTYRAG---
 T A C G C G T A C G T A G C T A A G T C A C G T T G A C A C T G C G T A A C T G A C G T G A C T A C G T
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:8
Score:0.51
Offset:-7
Orientation:forward strand
Alignment:-------GAAACTCGAGTTT
GAGAACCGAAACTG------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C G T A G C T A A G T C A C G T T G A C A C T G C G T A A C T G A C G T G A C T A C G T
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:9
Score:0.51
Offset:-7
Orientation:forward strand
Alignment:-------GAAACTCGAGTTT
CAAAATCGAAACTAA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C G T A G C T A A G T C A C G T T G A C A C T G C G T A A C T G A C G T G A C T A C G T
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A A C G T A C G T A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GAAACTCGAGTTT
GWAAYHTGABMC-
 T A C G C G T A C G T A G C T A A G T C A C G T T G A C A C T G C G T A A C T G A C G T G A C T A C G T
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C A C G T