Information for 16-RGTAAAGGTT (Motif 18)

C T A G A C T G C G A T C G T A C G T A C G T A A C T G C T A G A G C T A C G T
Reverse Opposite:
C G T A C T G A G A T C A G T C A C G T A C G T A C G T G C T A A G T C A G T C
p-value:1e-8
log p-value:-1.970e+01
Information Content per bp:1.834
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif78.8
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets52.2 +/- 25.2bp
Average Position of motif in Background51.0 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-RGTAAAGGTT-
ANGNAAAGGTCA
 A C G T C T A G A C T G C G A T C G T A C G T A C G T A A C T G C T A G A G C T A C G T A C G T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:RGTAAAGGTT-
----AAGCTTG
 C T A G A C T G C G A T C G T A C G T A C G T A A C T G C T A G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

PB0046.1_Mybl1_1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--RGTAAAGGTT-----
NNANTAACGGTTNNNAN
 A C G T A C G T C T A G A C T G C G A T C G T A C G T A C G T A A C T G C T A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C G T A C G A T G A C T C T G A T C G A A G T C A T C G C A T G G A C T G A C T C G A T G A C T G A T C G C T A C T G A

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:RGTAAAGGTT-
-NTAATKGTTT
 C T A G A C T G C G A T C G T A C G T A C G T A A C T G C T A G A G C T A C G T A C G T
A C G T A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T

PB0045.1_Myb_1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--RGTAAAGGTT-----
NNNNTAACGGTTNNNAN
 A C G T A C G T C T A G A C T G C G A T C G T A C G T A C G T A A C T G C T A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C G T A C G T A G A C T C T G A C G T A A G T C A T C G C A T G G A C T G A C T C A G T G T A C G T A C G C T A C G A T

PB0161.1_Rxra_2/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-RGTAAAGGTT-----
TCGCGAAGGTTGTACT
 A C G T C T A G A C T G C G A T C G T A C G T A C G T A A C T G C T A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----RGTAAAGGTT-
GTAGGGCAAAGGTCA
 A C G T A C G T A C G T A C G T C T A G A C T G C G A T C G T A C G T A C G T A A C T G C T A G A G C T A C G T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---RGTAAAGGTT-
TGGGGCAAAGGTCA
 A C G T A C G T A C G T C T A G A C T G C G A T C G T A C G T A C G T A A C T G C T A G A G C T A C G T A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---RGTAAAGGTT-
TAGGGCAAAGGTCA
 A C G T A C G T A C G T C T A G A C T G C G A T C G T A C G T A C G T A A C T G C T A G A G C T A C G T A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---RGTAAAGGTT
NATGGAAAAN---
 A C G T A C G T A C G T C T A G A C T G C G A T C G T A C G T A C G T A A C T G C T A G A G C T A C G T
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T