Information for 15-RGCCTSAGGC (Motif 17)

C T G A A T C G A T G C T G A C C A G T A T C G C T G A C T A G T A C G A T G C
Reverse Opposite:
T A C G A T G C G A T C G A C T T A G C G T C A A C T G T A C G T A G C G A C T
p-value:1e-8
log p-value:-1.980e+01
Information Content per bp:1.500
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.24%
Number of Background Sequences with motif406.4
Percentage of Background Sequences with motif0.83%
Average Position of motif in Targets55.5 +/- 25.9bp
Average Position of motif in Background48.3 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:1
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:RGCCTSAGGC-
TGCCTGAGGCN
 C T G A A T C G A T G C T G A C C A G T A T C G C T G A C T A G T A C G A T G C A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2A/MA0003.3/Jaspar

Match Rank:2
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:RGCCTSAGGC-
NGCCTGAGGCN
 C T G A A T C G A T G C T G A C C A G T A T C G C T G A C T A G T A C G A T G C A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:3
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:RGCCTSAGGC-
NGCCTNAGGCN
 C T G A A T C G A T G C T G A C C A G T A T C G C T G A C T A G T A C G A T G C A C G T
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--RGCCTSAGGC---
ATTGCCTGAGGCAAT
 A C G T A C G T C T G A A T C G A T G C T G A C C A G T A T C G C T G A C T A G T A C G A T G C A C G T A C G T A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--RGCCTSAGGC
WTGSCCTSAGGS
 A C G T A C G T C T G A A T C G A T G C T G A C C A G T A T C G C T G A C T A G T A C G A T G C
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:RGCCTSAGGC---
-GCCTCAGGGCAT
 C T G A A T C G A T G C T G A C C A G T A T C G C T G A C T A G T A C G A T G C A C G T A C G T A C G T
A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:7
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--RGCCTSAGGC---
ATTGCCTCAGGCAAT
 A C G T A C G T C T G A A T C G A T G C T G A C C A G T A T C G C T G A C T A G T A C G A T G C A C G T A C G T A C G T
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:8
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--RGCCTSAGGC---
ATTGCCTGAGGCGAA
 A C G T A C G T C T G A A T C G A T G C T G A C C A G T A T C G C T G A C T A G T A C G A T G C A C G T A C G T A C G T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:9
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--RGCCTSAGGC---
ATTCCCTGAGGGGAA
 A C G T A C G T C T G A A T C G A T G C T G A C C A G T A T C G C T G A C T A G T A C G A T G C A C G T A C G T A C G T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:10
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:RGCCTSAGGC--
TGCCCNGGGGCA
 C T G A A T C G A T G C T G A C C A G T A T C G C T G A C T A G T A C G A T G C A C G T A C G T
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A