Information for 9-GGAAAATACC (Motif 12)

C T A G A T C G C G T A C G T A C G T A C T G A G A C T C G T A G T A C A T G C
Reverse Opposite:
T A C G A C T G C G A T C T G A A G C T A C G T A C G T A C G T A T G C A G T C
p-value:1e-10
log p-value:-2.457e+01
Information Content per bp:1.844
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.32%
Number of Background Sequences with motif158.9
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets55.7 +/- 23.3bp
Average Position of motif in Background46.8 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC2/MA0152.1/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-GGAAAATACC
TGGAAAA----
 A C G T C T A G A T C G C G T A C G T A C G T A C T G A G A C T C G T A G T A C A T G C
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:2
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAATACC
AATGGAAAAT---
 A C G T A C G T A C G T C T A G A T C G C G T A C G T A C G T A C T G A G A C T C G T A G T A C A T G C
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:3
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAATACC
NNTGGAAANN---
 A C G T A C G T A C G T C T A G A T C G C G T A C G T A C G T A C T G A G A C T C G T A G T A C A T G C
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:4
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAATACC
NATGGAAAAN---
 A C G T A C G T A C G T C T A G A T C G C G T A C G T A C G T A C T G A G A C T C G T A G T A C A T G C
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAATACC
AATGGAAAAT---
 A C G T A C G T A C G T C T A G A T C G C G T A C G T A C G T A C T G A G A C T C G T A G T A C A T G C
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GGAAAATACC
GGAAATTCCC
 C T A G A T C G C G T A C G T A C G T A C T G A G A C T C G T A G T A C A T G C
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

RELA/MA0107.1/Jaspar

Match Rank:7
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GGAAAATACC
GGAAATTCCC
 C T A G A T C G C G T A C G T A C G T A C T G A G A C T C G T A G T A C A T G C
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

MF0003.1_REL_class/Jaspar

Match Rank:8
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GGAAAATACC
GGAAATCCCC
 C T A G A T C G C G T A C G T A C G T A C T G A G A C T C G T A G T A C A T G C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

REL/MA0101.1/Jaspar

Match Rank:9
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGAAAATACC
GGAAANCCCC
 C T A G A T C G C G T A C G T A C G T A C T G A G A C T C G T A G T A C A T G C
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGAAAATACC--
GGGAAATCCCCN
 C T A G A T C G C G T A C G T A C G T A C T G A G A C T C G T A G T A C A T G C A C G T A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T