Information for 2-AAAGGTCATG (Motif 4)

T C G A C T G A C T G A A T C G A T C G A C G T G A T C G C T A C G A T T C A G
Reverse Opposite:
A G T C G C T A C G A T C T A G T G C A T A G C T A G C G A C T G A C T A G C T
p-value:1e-15
log p-value:-3.597e+01
Information Content per bp:1.658
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif5.46%
Number of Background Sequences with motif493.5
Percentage of Background Sequences with motif1.24%
Average Position of motif in Targets44.8 +/- 26.3bp
Average Position of motif in Background48.3 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0049.1_Nr2f2_1/Jaspar

Match Rank:1
Score:0.92
Offset:-4
Orientation:forward strand
Alignment:----AAAGGTCATG--
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A C G T T C G A C T G A C T G A A T C G A T C G A C G T G A T C G C T A C G A T T C A G A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.90
Offset:-4
Orientation:reverse strand
Alignment:----AAAGGTCATG
ANGNAAAGGTCA--
 A C G T A C G T A C G T A C G T T C G A C T G A C T G A A T C G A T C G A C G T G A T C G C T A C G A T T C A G
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.89
Offset:-4
Orientation:forward strand
Alignment:----AAAGGTCATG--
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T A C G T T C G A C T G A C T G A A T C G A T C G A C G T G A T C G C T A C G A T T C A G A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

NR2F1/MA0017.2/Jaspar

Match Rank:4
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-AAAGGTCATG--
CAAAGGTCAAGGG
 A C G T T C G A C T G A C T G A A T C G A T C G A C G T G A T C G C T A C G A T T C A G A C G T A C G T
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

Esrrg/MA0643.1/Jaspar

Match Rank:5
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-AAAGGTCATG
TCAAGGTCAT-
 A C G T T C G A C T G A C T G A A T C G A T C G A C G T G A T C G C T A C G A T T C A G
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-AAAGGTCATG
CAAAGGTCAG-
 A C G T T C G A C T G A C T G A A T C G A T C G A C G T G A T C G C T A C G A T T C A G
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:7
Score:0.80
Offset:-4
Orientation:forward strand
Alignment:----AAAGGTCATG---
TATTCAAGGTCATGCGA
 A C G T A C G T A C G T A C G T T C G A C T G A C T G A A T C G A T C G A C G T G A T C G C T A C G A T T C A G A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-AAAGGTCATG
TCAAGGTCAN-
 A C G T T C G A C T G A C T G A A T C G A T C G A C G T G A T C G C T A C G A T T C A G
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.77
Offset:0
Orientation:forward strand
Alignment:AAAGGTCATG
TRAGGTCA--
 T C G A C T G A C T G A A T C G A T C G A C G T G A T C G C T A C G A T T C A G
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.77
Offset:0
Orientation:forward strand
Alignment:AAAGGTCATG
CAAGGHCANV
 T C G A C T G A C T G A A T C G A T C G A C G T G A T C G C T A C G A T T C A G
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G