Information for 15-AATACCACTT (Motif 24)

C G T A C G T A A C G T C G T A A G T C A G T C C G T A A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A C G T A C T G A C T G A C G T C G T A A C G T A C G T
p-value:1e-3
log p-value:-8.608e+00
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.8 +/- 28.0bp
Average Position of motif in Background66.8 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3-1/MA0124.2/Jaspar

Match Rank:1
Score:0.74
Offset:3
Orientation:forward strand
Alignment:AATACCACTT--
---ACCACTTAA
 C G T A C G T A A C G T C G T A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A

NKX2-3/MA0672.1/Jaspar

Match Rank:2
Score:0.74
Offset:3
Orientation:forward strand
Alignment:AATACCACTT---
---ACCACTTGAA
 C G T A C G T A A C G T C G T A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

NKX3-2/MA0122.2/Jaspar

Match Rank:3
Score:0.72
Offset:3
Orientation:forward strand
Alignment:AATACCACTT--
---ACCACTTAA
 C G T A C G T A A C G T C G T A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AATACCACTT--
--MRSCACTYAA
 C G T A C G T A A C G T C G T A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

PH0004.1_Nkx3-2/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AATACCACTT------
CATAACCACTTAACAAC
 A C G T C G T A C G T A A C G T C G T A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.66
Offset:4
Orientation:forward strand
Alignment:AATACCACTT---
----CCACTTGAA
 C G T A C G T A A C G T C G T A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AATACCACTT------
CTTAACCACTTAAGGAT
 A C G T C G T A C G T A A C G T C G T A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AATACCACTT------
TAAGCCACTTGAAATT
 C G T A C G T A A C G T C G T A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

PH0114.1_Nkx2-5/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AATACCACTT------
TAAGCCACTTGAATTT
 C G T A C G T A A C G T C G T A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

PB0114.1_Egr1_2/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AATACCACTT----
NNAGTCCCACTCNNNN
 A C G T A C G T C G T A C G T A A C G T C G T A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A