Information for 12-CAGRGGGCSTCGC (Motif 19)

A G T C C G T A A C T G T C G A A C T G A C T G A C T G A G T C A T G C C G A T A T G C A C T G A G T C
Reverse Opposite:
A C T G A G T C A T C G C G T A A T C G A C T G G T A C G T A C G T A C A G C T A G T C A C G T A C T G
p-value:1e-8
log p-value:-2.016e+01
Information Content per bp:1.905
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets68.0 +/- 20.3bp
Average Position of motif in Background74.3 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP4/MA0685.1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CAGRGGGCSTCGC---
NAAGGGGGCGTGGCTTN
 A C G T A G T C C G T A A C T G T C G A A C T G A C T G A C T G A G T C A T G C C G A T A T G C A C T G A G T C A C G T A C G T A C G T
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CAGRGGGCSTCGC
-RGTGGGYGTGGC
 A G T C C G T A A C T G T C G A A C T G A C T G A C T G A G T C A T G C C G A T A T G C A C T G A G T C
A C G T C T G A T C A G C A G T C T A G A T C G A C T G G A T C C A T G A C G T C A T G A C T G A G T C

KLF14/MA0740.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CAGRGGGCSTCGC-
AAGGGGGCGTGGCC
 A G T C C G T A A C T G T C G A A C T G A C T G A C T G A G T C A T G C C G A T A T G C A C T G A G T C A C G T
C T G A C T G A C T A G C A T G T C A G T C A G A T C G A G T C C A T G A C G T T C A G C A T G A G T C G T A C

SP8/MA0747.1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CAGRGGGCSTCGC
-AGTGGGCGTGGC
 A G T C C G T A A C T G T C G A A C T G A C T G A C T G A G T C A T G C C G A T A T G C A C T G A G T C
A C G T C T G A T C A G A C G T T C A G A T C G A T C G T G A C C A T G C A G T C A T G C A T G A G T C

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CAGRGGGCSTCGC
-RGKGGGCGKGGC
 A G T C C G T A A C T G T C G A A C T G A C T G A C T G A G T C A T G C C G A T A T G C A C T G A G T C
A C G T C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C

KLF16/MA0741.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CAGRGGGCSTCGC
--GGGGGCGTGGC
 A G T C C G T A A C T G T C G A A C T G A C T G A C T G A G T C A T G C C G A T A T G C A C T G A G T C
A C G T A C G T C T A G C A T G C T A G A T C G A C T G G A T C C A T G A C G T C A T G C A T G A G T C

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CAGRGGGCSTCGC-
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T A G T C C G T A A C T G T C G A A C T G A C T G A C T G A G T C A T G C C G A T A T G C A C T G A G T C A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAGRGGGCSTCGC--
GARTGGTCATCGCCC
 A G T C C G T A A C T G T C G A A C T G A C T G A C T G A G T C A T G C C G A T A T G C A C T G A G T C A C G T A C G T
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CAGRGGGCSTCGC--
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G T C G A A C T G A C T G A C T G A G T C A T G C C G A T A T G C A C T G A G T C A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CAGRGGGCSTCGC
-RGKGGGCGGAGC
 A G T C C G T A A C T G T C G A A C T G A C T G A C T G A G T C A T G C C G A T A T G C A C T G A G T C
A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C