Information for 4-CTTCCCTGACCCCACC (Motif 17)

A G T C A C G T A C G T A G T C A T G C A G T C A C G T C T A G T C G A A G T C A G T C A G T C G T A C C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C T G A C T G A C T G A C T G A C G T A G T C C G T A C T A G A T C G C T A G G T C A C G T A A C T G
p-value:1e-10
log p-value:-2.409e+01
Information Content per bp:1.867
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.8 +/- 15.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0157.1_Rara_2/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTTCCCTGACCCCACC--
--NNCNTGACCCCGCTCT
 A G T C A C G T A C G T A G T C A T G C A G T C A C G T C T A G T C G A A G T C A G T C A G T C G T A C C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

PB0107.1_Ascl2_2/Jaspar

Match Rank:2
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CTTCCCTGACCCCACC-----
-----CTATCCCCGCCCTATT
 A G T C A C G T A C G T A G T C A T G C A G T C A C G T C T A G T C G A A G T C A G T C A G T C G T A C C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T T G C A C G A T G T A C T A G C G T A C T G A C C T A G A G T C G A T C G A T C A G C T C T G A A C G T G A C T

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTTCCCTGACCCCACC--
-TGTCGTGACCCCTTAAT
 A G T C A C G T A C G T A G T C A T G C A G T C A C G T C T A G T C G A A G T C A G T C A G T C G T A C C G T A A G T C A G T C A C G T A C G T
A C G T C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:4
Score:0.60
Offset:6
Orientation:forward strand
Alignment:CTTCCCTGACCCCACC-----
------NRGCCCCRCCCHBNN
 A G T C A C G T A C G T A G T C A T G C A G T C A C G T C T A G T C G A A G T C A G T C A G T C G T A C C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

PB0097.1_Zfp281_1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTTCCCTGACCCCACC
-TCCCCCCCCCCCCCC
 A G T C A C G T A C G T A G T C A T G C A G T C A C G T C T A G T C G A A G T C A G T C A G T C G T A C C G T A A G T C A G T C
A C G T C A G T A G T C G T A C G T A C T A G C G T A C G A T C G A T C G T A C G A T C G T A C G T A C G T A C G A T C T G A C

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTTCCCTGACCCCACC
---CCCCTCCCCCAC-
 A G T C A C G T A C G T A G T C A T G C A G T C A C G T C T A G T C G A A G T C A G T C A G T C G T A C C G T A A G T C A G T C
A C G T A C G T A C G T T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTTCCCTGACCCCACC--
--NNNNTGACCCGGCGCG
 A G T C A C G T A C G T A G T C A T G C A G T C A C G T C T A G T C G A A G T C A G T C A G T C G T A C C G T A A G T C A G T C A C G T A C G T
A C G T A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

KLF5/MA0599.1/Jaspar

Match Rank:8
Score:0.58
Offset:8
Orientation:forward strand
Alignment:CTTCCCTGACCCCACC--
--------GCCCCGCCCC
 A G T C A C G T A C G T A G T C A T G C A G T C A C G T C T A G T C G A A G T C A G T C A G T C G T A C C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

Klf4/MA0039.2/Jaspar

Match Rank:9
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:CTTCCCTGACCCCACC--
--------GCCCCACCCA
 A G T C A C G T A C G T A G T C A T G C A G T C A C G T C T A G T C G A A G T C A G T C A G T C G T A C C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A

PB0118.1_Esrra_2/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTTCCCTGACCCCACC--
-NNNNTTGACCCCTNNNN
 A G T C A C G T A C G T A G T C A T G C A G T C A C G T C T A G T C G A A G T C A G T C A G T C G T A C C G T A A G T C A G T C A C G T A C G T
A C G T C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C