Information for 4-GCCTCCCTGCATGGCC (Motif 5)

A C T G A G T C A G T C A C G T A T G C A G T C A G T C A C G T A C T G A G T C T C G A A C G T A C T G A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A G T C C G T A A C G T A C T G A G T C C G T A A C T G A C T G A T C G C G T A A C T G A C T G T A G C
p-value:1e-10
log p-value:-2.466e+01
Information Content per bp:1.883
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.8 +/- 19.9bp
Average Position of motif in Background58.5 +/- 16.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCCTCCCTGCATGGCC--
---TCCCAGMCRAGCCCC
 A C T G A G T C A G T C A C G T A T G C A G T C A G T C A C G T A C T G A G T C T C G A A C G T A C T G A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

GCM1/MA0646.1/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCCTCCCTGCATGGCC
--GTACCCGCATN---
 A C T G A G T C A G T C A C G T A T G C A G T C A G T C A C G T A C T G A G T C T C G A A C G T A C T G A C T G A G T C A G T C
A C G T A C G T T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GCCTCCCTGCATGGCC
---DCTCAGCAGG---
 A C T G A G T C A G T C A C G T A T G C A G T C A G T C A C G T A C T G A G T C T C G A A C G T A C T G A C T G A G T C A G T C
A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCCTCCCTGCATGGCC
GCAGCCAAGCGTGACN
 A C T G A G T C A G T C A C G T A T G C A G T C A G T C A C G T A C T G A G T C T C G A A C G T A C T G A C T G A G T C A G T C
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GCCTCCCTGCATGGCC
-CCACACAGCAGGAGA
 A C T G A G T C A G T C A C G T A T G C A G T C A G T C A C G T A C T G A G T C T C G A A C G T A C T G A C T G A G T C A G T C
A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

GCM2/MA0767.1/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GCCTCCCTGCATGGCC
---TACCCGCATN---
 A C T G A G T C A G T C A C G T A T G C A G T C A G T C A C G T A C T G A G T C T C G A A C G T A C T G A C T G A G T C A G T C
A C G T A C G T A C G T G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GCCTCCCTGCATGGCC
GGCCYCCTGCTGDGH-
 A C T G A G T C A G T C A C G T A T G C A G T C A G T C A C G T A C T G A G T C T C G A A C G T A C T G A C T G A G T C A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GCCTCCCTGCATGGCC
TCGTACCCGCATCATT
 A C T G A G T C A G T C A C G T A T G C A G T C A G T C A C G T A C T G A G T C T C G A A C G T A C T G A C T G A G T C A G T C
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:9
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GCCTCCCTGCATGGCC--
---TGCCTGCGYCMCCTT
 A C T G A G T C A G T C A C G T A T G C A G T C A G T C A C G T A C T G A G T C T C G A A C G T A C T G A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GCCTCCCTGCATGGCC
---TGCCCNNAGGGCA
 A C T G A G T C A G T C A C G T A T G C A G T C A G T C A C G T A C T G A G T C T C G A A C G T A C T G A C T G A G T C A G T C
A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A