Information for 3-GTGGCCCAGAACA (Motif 4)

A C T G C A G T C T A G A C T G A G T C A G T C A G T C C T G A A C T G C G T A C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C G T A G T C A G C T A C T G A C T G A C T G A G T C A G T C G C T A A G T C
p-value:1e-10
log p-value:-2.466e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.4 +/- 25.4bp
Average Position of motif in Background79.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.67
Offset:4
Orientation:forward strand
Alignment:GTGGCCCAGAACA-
----CCAGGAACAG
 A C T G C A G T C T A G A C T G A G T C A G T C A G T C C T G A A C T G C G T A C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTGGCCCAGAACA-----
-AACACCAAAACAAAGGA
 A C T G C A G T C T A G A C T G A G T C A G T C A G T C C T G A A C T G C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTGGCCCAGAACA---
-NGNTCTAGAACCNGV
 A C T G C A G T C T A G A C T G A G T C A G T C A G T C C T G A A C T G C G T A C G T A A G T C C G T A A C G T A C G T A C G T
A C G T C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GTGGCCCAGAACA
--TGCCCAGNHW-
 A C T G C A G T C T A G A C T G A G T C A G T C A G T C C T G A A C T G C G T A C G T A A G T C C G T A
A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTGGCCCAGAACA----
NNGATCTAGAACCTNNN
 A C T G C A G T C T A G A C T G A G T C A G T C A G T C C T G A A C T G C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GTGGCCCAGAACA--
CGAAGCACACAAAATA
 A C G T A C T G C A G T C T A G A C T G A G T C A G T C A G T C C T G A A C T G C G T A C G T A A G T C C G T A A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTGGCCCAGAACA
TGGGGCCCAC----
 A C G T A C T G C A G T C T A G A C T G A G T C A G T C A G T C C T G A A C T G C G T A C G T A A G T C C G T A
G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GTGGCCCAGAACA
-AGGCCTAG----
 A C T G C A G T C T A G A C T G A G T C A G T C A G T C C T G A A C T G C G T A C G T A A G T C C G T A
A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GTGGCCCAGAACA
ATTTCCAAGAA--
 A C T G C A G T C T A G A C T G A G T C A G T C A G T C C T G A A C T G C G T A C G T A A G T C C G T A
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GTGGCCCAGAACA
-CTGCCCGCA---
 A C T G C A G T C T A G A C T G A G T C A G T C A G T C C T G A A C T G C G T A C G T A A G T C C G T A
A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T