Information for 2-GGGGCGGAGCCGG (Motif 2)

C A T G C T A G T A C G A C T G A G T C T A C G A C T G C T G A A T C G A G T C A G T C A T C G T A C G
Reverse Opposite:
A T G C T A G C A C T G A C T G A T G C A G C T A G T C A T G C C T A G G T A C A G T C A G T C G T A C
p-value:1e-13
log p-value:-3.050e+01
Information Content per bp:1.791
Number of Target Sequences with motif66.0
Percentage of Target Sequences with motif7.23%
Number of Background Sequences with motif1210.6
Percentage of Background Sequences with motif2.50%
Average Position of motif in Targets53.5 +/- 23.6bp
Average Position of motif in Background47.6 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-GGGGCGGAGCCGG
GGGGGCGGGGCC--
 A C G T C A T G C T A G T A C G A C T G A G T C T A C G A C T G C T G A A T C G A G T C A G T C A T C G T A C G
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--GGGGCGGAGCCGG
AGGGGGCGGGGCTG-
 A C G T A C G T C A T G C T A G T A C G A C T G A G T C T A C G A C T G C T G A A T C G A G T C A G T C A T C G T A C G
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--GGGGCGGAGCCGG
RGKGGGCGGAGC---
 A C G T A C G T C A T G C T A G T A C G A C T G A G T C T A C G A C T G C T G A A T C G A G T C A G T C A T C G T A C G
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:4
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GGGGCGGAGCCGG
GGGGGCGGGGC---
 A C G T C A T G C T A G T A C G A C T G A G T C T A C G A C T G C T G A A T C G A G T C A G T C A T C G T A C G
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:5
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---GGGGCGGAGCCGG
NNVDGGGYGGGGCYN-
 A C G T A C G T A C G T C A T G C T A G T A C G A C T G A G T C T A C G A C T G C T G A A T C G A G T C A G T C A T C G T A C G
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A A C G T

SP2/MA0516.1/Jaspar

Match Rank:6
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGCGGAGCCGG
GGGNGGGGGCGGGGC---
 A C G T A C G T A C G T A C G T A C G T C A T G C T A G T A C G A C T G A G T C T A C G A C T G C T G A A T C G A G T C A G T C A T C G T A C G
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:7
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GGGGCGGAGCCGG
GGGGNGGGGC---
 C A T G C T A G T A C G A C T G A G T C T A C G A C T G C T G A A T C G A G T C A G T C A T C G T A C G
C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GGGGCGGAGCCGG
MKGGGYGTGGCC--
 A C G T C A T G C T A G T A C G A C T G A G T C T A C G A C T G C T G A A T C G A G T C A G T C A T C G T A C G
G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:9
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GGGGCGGAGCCGG
NNAGGGGCGGGGTNNA
 A C G T A C G T A C G T C A T G C T A G T A C G A C T G A G T C T A C G A C T G C T G A A T C G A G T C A G T C A T C G T A C G
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

POL011.1_XCPE1/Jaspar

Match Rank:10
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GGGGCGGAGCCGG
-GGGCGGGACC--
 C A T G C T A G T A C G A C T G A G T C T A C G A C T G C T G A A T C G A G T C A G T C A T C G T A C G
A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T