Information for 15-GATTMCTAGCGGT (Motif 21)

A C T G G T C A C G A T A C G T G T A C A G T C G A C T G C T A C T A G A T G C C A T G A C T G A G C T
Reverse Opposite:
C T G A A G T C G T A C T A C G A G T C C G A T C G T A C T A G C A T G G T C A C G T A A C G T A G T C
p-value:1e-7
log p-value:-1.740e+01
Information Content per bp:1.736
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif34.4
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets55.8 +/- 25.2bp
Average Position of motif in Background58.5 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2/MA0511.2/Jaspar

Match Rank:1
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GATTMCTAGCGGT--
------TTGCGGTTT
 A C T G G T C A C G A T A C G T G T A C A G T C G A C T G C T A C T A G A T G C C A T G A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GATTMCTAGCGGT--
GGGTTACTANAGGTCA
 A C G T A C T G G T C A C G A T A C G T G T A C A G T C G A C T G C T A C T A G A T G C C A T G A C T G A G C T A C G T A C G T
C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A

RUNX3/MA0684.1/Jaspar

Match Rank:3
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GATTMCTAGCGGT--
-----TTTGCGGTTT
 A C T G G T C A C G A T A C G T G T A C A G T C G A C T G C T A C T A G A T G C C A T G A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

ELK1/MA0028.2/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GATTMCTAGCGGT
---NACTTCCGGT
 A C T G G T C A C G A T A C G T G T A C A G T C G A C T G C T A C T A G A T G C C A T G A C T G A G C T
A C G T A C G T A C G T G A T C T C G A A G T C C G A T A C G T T G A C T G A C A C T G A T C G G A C T

PB0046.1_Mybl1_1/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GATTMCTAGCGGT------
--NNANTAACGGTTNNNAN
 A C T G G T C A C G A T A C G T G T A C A G T C G A C T G C T A C T A G A T G C C A T G A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C T G A C G T A C G A T G A C T C T G A T C G A A G T C A T C G C A T G G A C T G A C T C G A T G A C T G A T C G C T A C T G A

PH0037.1_Hdx/Jaspar

Match Rank:6
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------GATTMCTAGCGGT
TNNNATGATTTCNNCNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A C G A T A C G T G T A C A G T C G A C T G C T A C T A G A T G C C A T G A C T G A G C T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T A C G T A C G T

ERF/MA0760.1/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GATTMCTAGCGGT
---CACTTCCGGT
 A C T G G T C A C G A T A C G T G T A C A G T C G A C T G C T A C T A G A T G C C A T G A C T G A G C T
A C G T A C G T A C G T A G T C T C G A A G T C C G A T A C G T A T G C A G T C A C T G T C A G A G C T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GATTMCTAGCGGT
NNAATTAGTCACGGT
 A C G T A C G T A C T G G T C A C G A T A C G T G T A C A G T C G A C T G C T A C T A G A T G C C A T G A C T G A G C T
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

ELK3/MA0759.1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GATTMCTAGCGGT
---NACTTCCGGT
 A C T G G T C A C G A T A C G T G T A C A G T C G A C T G C T A C T A G A T G C C A T G A C T G A G C T
A C G T A C G T A C G T G A C T T C G A A G T C C G A T A C G T T G A C A G T C A C T G A C T G G A C T

OTX1/MA0711.1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GATTMCTAGCGGT
CGGATTAN-------
 A C G T A C G T A C T G G T C A C G A T A C G T G T A C A G T C G A C T G C T A C T A G A T G C C A T G A C T G A G C T
T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T