Information for 2-GDGCATKCTGGGA (Motif 2)

T C A G C A T G A T C G T A G C T G C A A G C T A C T G T A G C A G C T A C T G A C T G A C T G C G T A
Reverse Opposite:
C G A T A G T C A G T C A G T C C T G A A T C G T G A C T C G A A C G T A T C G A T G C G T A C A G T C
p-value:1e-271
log p-value:-6.250e+02
Information Content per bp:1.667
Number of Target Sequences with motif325.0
Percentage of Target Sequences with motif37.79%
Number of Background Sequences with motif1216.4
Percentage of Background Sequences with motif2.67%
Average Position of motif in Targets49.2 +/- 22.2bp
Average Position of motif in Background50.5 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:GDGCATKCTGGGA---
-RGSMTBCTGGGAAAT
 T C A G C A T G A T C G T A G C T G C A A G C T A C T G T A G C A G C T A C T G A C T G A C T G C G T A A C G T A C G T A C G T
A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:2
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--GDGCATKCTGGGA-
CAATGCATTGTGGGTA
 A C G T A C G T T C A G C A T G A T C G T A G C T G C A A G C T A C T G T A G C A G C T A C T G A C T G A C T G C G T A A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GDGCATKCTGGGA---------
--GCATTCTGGGAATTGTAGTT
 T C A G C A T G A T C G T A G C T G C A A G C T A C T G T A G C A G C T A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GDGCATKCTGGGA---------
--GCMTBCTGGGAGTTGTAGTY
 T C A G C A T G A T C G T A G C T G C A A G C T A C T G T A G C A G C T A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:GDGCATKCTGGGA---
------CSTGGGAAAD
 T C A G C A T G A T C G T A G C T G C A A G C T A C T G T A G C A G C T A C T G A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GDGCATKCTGGGA--
TCNCCTGCTGNGNNN
 T C A G C A T G A T C G T A G C T G C A A G C T A C T G T A G C A G C T A C T G A C T G A C T G C G T A A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

STAT3/MA0144.2/Jaspar

Match Rank:7
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GDGCATKCTGGGA--
----CTTCTGGGAAA
 T C A G C A T G A T C G T A G C T G C A A G C T A C T G T A G C A G C T A C T G A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GDGCATKCTGGGA--
TNTCCTGCTGTGNNG
 T C A G C A T G A T C G T A G C T G C A A G C T A C T G T A G C A G C T A C T G A C T G A C T G C G T A A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GDGCATKCTGGGA--
NNTCCTGCTGTGNNN
 T C A G C A T G A T C G T A G C T G C A A G C T A C T G T A G C A G C T A C T G A C T G A C T G C G T A A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GDGCATKCTGGGA
---CCTGCTGAGH
 T C A G C A T G A T C G T A G C T G C A A G C T A C T G T A G C A G C T A C T G A C T G A C T G C G T A
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A