Information for 8-AAGGAGTTCCCGTGCC (Motif 10)

C G T A C G T A A C T G T A C G T C G A A C T G A C G T A C G T A T G C A G T C A G T C T A C G A C G T A C T G A T G C A G T C
Reverse Opposite:
C T A G A T C G G T A C G T C A A T G C A C T G T A C G A T C G G T C A G T C A T G A C A G C T A G T C G T A C C G A T A C G T
p-value:1e-12
log p-value:-2.869e+01
Information Content per bp:1.711
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.3 +/- 13.1bp
Average Position of motif in Background41.3 +/- 15.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0147.1_Max_2/Jaspar

Match Rank:1
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AAGGAGTTCCCGTGCC--
----NNGTCGCGTGNCAC
 C G T A C G T A A C T G T A C G T C G A A C T G A C G T A C G T A T G C A G T C A G T C T A C G A C G T A C T G A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C

Hes1/MA1099.1/Jaspar

Match Rank:2
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:AAGGAGTTCCCGTGCC
------NNCGCGTGNN
 C G T A C G T A A C T G T A C G T C G A A C T G A C G T A C G T A T G C A G T C A G T C T A C G A C G T A C T G A T G C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.50
Offset:4
Orientation:forward strand
Alignment:AAGGAGTTCCCGTGCC--
----NGTTGCCATGGCAA
 C G T A C G T A A C T G T A C G T C G A A C T G A C G T A C G T A T G C A G T C A G T C T A C G A C G T A C T G A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.49
Offset:4
Orientation:forward strand
Alignment:AAGGAGTTCCCGTGCC--
----GGTTGCCATGGCAA
 C G T A C G T A A C T G T A C G T C G A A C T G A C G T A C G T A T G C A G T C A G T C T A C G A C G T A C T G A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

USF1/MA0093.2/Jaspar

Match Rank:5
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:AAGGAGTTCCCGTGCC
-----GGTCACGTGGC
 C G T A C G T A A C T G T A C G T C G A A C T G A C G T A C G T A T G C A G T C A G T C T A C G A C G T A C T G A T G C A G T C
A C G T A C G T A C G T A C G T A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C

BHLHE40/MA0464.2/Jaspar

Match Rank:6
Score:0.49
Offset:6
Orientation:forward strand
Alignment:AAGGAGTTCCCGTGCC
------ATCACGTGAC
 C G T A C G T A A C T G T A C G T C G A A C T G A C G T A C G T A T G C A G T C A G T C T A C G A C G T A C T G A T G C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T G C A C A G T G T A C T G C A G A T C T C A G G A C T A C T G G T C A G A T C

IRF2/MA0051.1/Jaspar

Match Rank:7
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--AAGGAGTTCCCGTGCC
GTTTTGCTTTCACTTTCC
 A C G T A C G T C G T A C G T A A C T G T A C G T C G A A C T G A C G T A C G T A T G C A G T C A G T C T A C G A C G T A C T G A T G C A G T C
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.49
Offset:4
Orientation:forward strand
Alignment:AAGGAGTTCCCGTGCC
----HTTTCCCASG--
 C G T A C G T A A C T G T A C G T C G A A C T G A C G T A C G T A T G C A G T C A G T C T A C G A C G T A C T G A T G C A G T C
A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:9
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:AAGGAGTTCCCGTGCC
------GGCACGTGNC
 C G T A C G T A A C T G T A C G T C G A A C T G A C G T A C G T A T G C A G T C A G T C T A C G A C G T A C T G A T G C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.48
Offset:7
Orientation:reverse strand
Alignment:AAGGAGTTCCCGTGCC-
-------TCACGTGACC
 C G T A C G T A A C T G T A C G T C G A A C T G A C G T A C G T A T G C A G T C A G T C T A C G A C G T A C T G A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C