Information for 13-CGCGAGGTCA (Motif 17)

G T A C A C T G A G T C A C T G T C G A A C T G A C T G G C A T A G T C C T G A
Reverse Opposite:
A G C T C T A G C G T A T G A C A G T C A G C T A G T C A C T G A G T C A C T G
p-value:1e-8
log p-value:-1.981e+01
Information Content per bp:1.851
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.53%
Number of Background Sequences with motif68.4
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets53.7 +/- 29.7bp
Average Position of motif in Background46.8 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.73
Offset:2
Orientation:forward strand
Alignment:CGCGAGGTCA
--TRAGGTCA
 G T A C A C T G A G T C A C T G T C G A A C T G A C T G G C A T A G T C C T G A
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.72
Offset:2
Orientation:forward strand
Alignment:CGCGAGGTCA
--AGRGGTCA
 G T A C A C T G A G T C A C T G T C G A A C T G A C T G G C A T A G T C C T G A
A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CGCGAGGTCA-----
NTNNNGGGGTCANGNNN
 A C G T A C G T G T A C A C T G A G T C A C T G T C G A A C T G A C T G G C A T A G T C C T G A A C G T A C G T A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.68
Offset:4
Orientation:forward strand
Alignment:CGCGAGGTCA
----AGGTCA
 G T A C A C T G A G T C A C T G T C G A A C T G A C T G G C A T A G T C C T G A
A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CGCGAGGTCA----
CGCGCCGGGTCACGTA
 A C G T A C G T G T A C A C T G A G T C A C T G T C G A A C T G A C T G G C A T A G T C C T G A A C G T A C G T A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CGCGAGGTCA-
-TCAAGGTCAN
 G T A C A C T G A G T C A C T G T C G A A C T G A C T G G C A T A G T C C T G A A C G T
A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

Tcfl5/MA0632.1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CGCGAGGTCA
GGCACGTGCC--
 A C G T A C G T G T A C A C T G A G T C A C T G T C G A A C T G A C T G G C A T A G T C C T G A
C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CGCGAGGTCA----
AGAGCGGGGTCAAGTA
 A C G T A C G T G T A C A C T G A G T C A C T G T C G A A C T G A C T G G C A T A G T C C T G A A C G T A C G T A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

PB0030.1_Hnf4a_1/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CGCGAGGTCA-----
CTCCAGGGGTCAATTGA
 A C G T A C G T G T A C A C T G A G T C A C T G T C G A A C T G A C T G G C A T A G T C C T G A A C G T A C G T A C G T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

NR4A2/MA0160.1/Jaspar

Match Rank:10
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CGCGAGGTCA-
---AAGGTCAC
 G T A C A C T G A G T C A C T G T C G A A C T G A C T G G C A T A G T C C T G A A C G T
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C