Information for 17-AGGGCAGCTCTCG (Motif 21)

C G T A A C T G A C T G C T A G A G T C C G T A A C T G A G T C A C G T A G T C A C G T A T G C A C T G
Reverse Opposite:
A G T C A T C G C G T A A C T G C G T A A C T G A G T C G A C T A C T G A G T C A G T C A G T C A C G T
p-value:1e-8
log p-value:-1.961e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.6 +/- 20.3bp
Average Position of motif in Background59.0 +/- 42.9bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AGGGCAGCTCTCG-----
---NNAATTCTCGNTNAN
 C G T A A C T G A C T G C T A G A G T C C G T A A C T G A G T C A C G T A G T C A C G T A T G C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGGGCAGCTCTCG
TNNGGGCAG------
 A C G T A C G T C G T A A C T G A C T G C T A G A G T C C G T A A C T G A G T C A C G T A G T C A C G T A T G C A C T G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGGGCAGCTCTCG
-NNGCAGCTGTC-
 C G T A A C T G A C T G C T A G A G T C C G T A A C T G A G T C A C G T A G T C A C G T A T G C A C T G
A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGGGCAGCTCTCG
-NNGCAGCTGTT-
 C G T A A C T G A C T G C T A G A G T C C G T A A C T G A G T C A C G T A G T C A C G T A T G C A C T G
A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AGGGCAGCTCTCG-----
---ACCACTCTCGGTCAC
 C G T A A C T G A C T G C T A G A G T C C G T A A C T G A G T C A C G T A G T C A C G T A T G C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AGGGCAGCTCTCG
----CAGCTGTT-
 C G T A A C T G A C T G C T A G A G T C C G T A A C T G A G T C A C G T A G T C A C G T A T G C A C T G
A C G T A C G T A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGGGCAGCTCTCG-
--AGCAGCTGCTNN
 C G T A A C T G A C T G C T A G A G T C C G T A A C T G A G T C A C G T A G T C A C G T A T G C A C T G A C G T
A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Myod1/MA0499.1/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGGGCAGCTCTCG--
--TGCAGCTGTCCCT
 C G T A A C T G A C T G C T A G A G T C C G T A A C T G A G T C A C G T A G T C A C G T A T G C A C T G A C G T A C G T
A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

PB0003.1_Ascl2_1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AGGGCAGCTCTCG--
NNNNAGCAGCTGCTGAN
 A C G T A C G T C G T A A C T G A C T G C T A G A G T C C G T A A C T G A G T C A C G T A G T C A C G T A T G C A C T G A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

PB0138.1_Irf4_2/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AGGGCAGCTCTCG-----
---AGTATTCTCGGTTGC
 C G T A A C T G A C T G C T A G A G T C C G T A A C T G A G T C A C G T A G T C A C G T A T G C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C