Information for 12-CAATCATAGA (Motif 19)

A G T C C G T A T C G A A C G T G A T C G T C A A C G T C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T T G C A A C G T C A T G C G T A A C G T A C G T A C T G
p-value:1e-8
log p-value:-2.052e+01
Information Content per bp:1.862
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.35%
Number of Background Sequences with motif47.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets51.6 +/- 28.5bp
Average Position of motif in Background56.4 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CAATCATAGA
CCAATCAA---
 A C G T A G T C C G T A T C G A A C G T G A T C G T C A A C G T C G T A A C T G C G T A
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CAATCATAGA
CCATCAATCAAA--
 A C G T A C G T A C G T A C G T A G T C C G T A T C G A A C G T G A T C G T C A A C G T C G T A A C T G C G T A
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CAATCATAGA
CAAATCACTG-
 A C G T A G T C C G T A T C G A A C G T G A T C G T C A A C G T C G T A A C T G C G T A
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CAATCATAGA--
GACCACATTCATACAAT
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A T C G A A C G T G A T C G T C A A C G T C G T A A C T G C G T A A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

PB0172.1_Sox1_2/Jaspar

Match Rank:5
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------CAATCATAGA
NNNTAACAATTATAN-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A T C G A A C G T G A T C G T C A A C G T C G T A A C T G C G T A
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G A C G T

PH0037.1_Hdx/Jaspar

Match Rank:6
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CAATCATAGA-
AAGGCGAAATCATCGCA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A T C G A A C G T G A T C G T C A A C G T C G T A A C T G C G T A A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

Gfi1b/MA0483.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CAATCATAGA-
AAATCACAGCA
 A G T C C G T A T C G A A C G T G A T C G T C A A C G T C G T A A C T G C G T A A C G T
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

MEF2C/MA0497.1/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CAATCATAGA-
ATGCTAAAAATAGAA
 A C G T A C G T A C G T A C G T A G T C C G T A T C G A A C G T G A T C G T C A A C G T C G T A A C T G C G T A A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

MSX2/MA0708.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAATCATAGA
CCAATTAA---
 A C G T A G T C C G T A T C G A A C G T G A T C G T C A A C G T C G T A A C T G C G T A
T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CAATCATAGA
AAATCACTGC
 A G T C C G T A T C G A A C G T G A T C G T C A A C G T C G T A A C T G C G T A
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C