Information for 10-CACCAGGGGATTA (Motif 18)

A G T C G T C A A G T C A G T C C G T A A C T G A C T G A C T G C T A G G T C A A C G T A C G T G T C A
Reverse Opposite:
A C G T C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C G T C T A G A C T G A C G T A C T G
p-value:1e-4
log p-value:-1.134e+01
Information Content per bp:1.896
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.2 +/- 27.5bp
Average Position of motif in Background40.9 +/- 10.4bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.71
Offset:3
Orientation:forward strand
Alignment:CACCAGGGGATTA-
---AAGAGGATTAG
 A G T C G T C A A G T C A G T C C G T A A C T G A C T G A C T G C T A G G T C A A C G T A C G T G T C A A C G T
A C G T A C G T A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CACCAGGGGATTA
GTCCCCAGGGGA---
 A C G T A C G T A G T C G T C A A G T C A G T C C G T A A C T G A C T G A C T G C T A G G T C A A C G T A C G T G T C A
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:CACCAGGGGATTA
-----NGGGATTA
 A G T C G T C A A G T C A G T C C G T A A C T G A C T G A C T G C T A G G T C A A C G T A C G T G T C A
A C G T A C G T A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

PITX3/MA0714.1/Jaspar

Match Rank:4
Score:0.67
Offset:6
Orientation:reverse strand
Alignment:CACCAGGGGATTA--
------GGGATTANN
 A G T C G T C A A G T C A G T C C G T A A C T G A C T G A C T G C T A G G T C A A C G T A C G T G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

PH0139.1_Pitx3/Jaspar

Match Rank:5
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CACCAGGGGATTA------
---AGGGGGATTAGCTGCC
 A G T C G T C A A G T C A G T C C G T A A C T G A C T G A C T G C T A G G T C A A C G T A C G T G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

PH0121.1_Obox1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CACCAGGGGATTA-----
-TTAAGGGGATTAACTAC
 A G T C G T C A A G T C A G T C C G T A A C T G A C T G A C T G C T A G G T C A A C G T A C G T G T C A A C G T A C G T A C G T A C G T A C G T
A C G T C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

GSC/MA0648.1/Jaspar

Match Rank:7
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:CACCAGGGGATTA--
-----NNGGATTAGN
 A G T C G T C A A G T C A G T C C G T A A C T G A C T G A C T G C T A G G T C A A C G T A C G T G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

Pitx1/MA0682.1/Jaspar

Match Rank:8
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:CACCAGGGGATTA-
------GGGATTAA
 A G T C G T C A A G T C A G T C C G T A A C T G A C T G A C T G C T A G G T C A A C G T A C G T G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A

PH0015.1_Crx/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CACCAGGGGATTA----
-CGTTGGGGATTAGCCT
 A G T C G T C A A G T C A G T C C G T A A C T G A C T G A C T G C T A G G T C A A C G T A C G T G T C A A C G T A C G T A C G T A C G T
A C G T A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

GSC2/MA0891.1/Jaspar

Match Rank:10
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:CACCAGGGGATTA--
-----GNGGATTAGN
 A G T C G T C A A G T C A G T C C G T A A C T G A C T G A C T G C T A G G T C A A C G T A C G T G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G