Information for 10-GGCCAATCCA (Motif 22)

A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G C G T A A C G T A C G T A C T G A C T G A G T C A G T C
p-value:1e-7
log p-value:-1.659e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets85.8 +/- 10.4bp
Average Position of motif in Background54.2 +/- 23.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GGCCAATCCA
AGCCAATCGG
 A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C A G T C C G T A
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GGCCAATCCA
ACTAGCCAATCA-
 A C G T A C G T A C G T A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C A G T C C G T A
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GGCCAATCCA----
--SSAATCCACANN
 A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

FOXH1/MA0479.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GGCCAATCCA--
-TCCAATCCACA
 A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C A G T C C G T A A C G T A C G T
A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

NFYB/MA0502.1/Jaspar

Match Rank:5
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----GGCCAATCCA
AAATGGACCAATCAG
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C A G T C C G T A
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGCCAATCCA
TGCCAA----
 A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C A G T C C G T A
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:7
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GGCCAATCCA
-GCTAATCC-
 A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C A G T C C G T A
A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T

Dux/MA0611.1/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GGCCAATCCA
--CCAATCAA
 A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C A G T C C G T A
A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

PH0015.1_Crx/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGCCAATCCA-----
AGGCTAATCCCCAANG
 A C G T A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGCCAATCCA
CGTGCCAAG---
 A C G T A C G T A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C A G T C C G T A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T