Information for 10-GGGAGGTTACTGC (Motif 13)

A C T G A C T G C T A G C G T A A C T G A C T G C G A T A G C T C G T A A G T C A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C T G A C G T C T G A C G T A A G T C A G T C A C G T A G T C G T A C A G T C
p-value:1e-9
log p-value:-2.155e+01
Information Content per bp:1.933
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.0 +/- 27.2bp
Average Position of motif in Background75.4 +/- 9.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGGAGGTTACTGC-
AGGGAAGTCATTTCT
 A C G T A C T G A C T G C T A G C G T A A C T G A C T G C G A T A G C T C G T A A G T C A C G T A C T G A G T C A C G T
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGGAGGTTACTGC---
-AGATGCTRCTRCCHT
 A C T G A C T G C T A G C G T A A C T G A C T G C G A T A G C T C G T A A G T C A C G T A C T G A G T C A C G T A C G T A C G T
A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GGGAGGTTACTGC
--AAGGTCAC---
 A C T G A C T G C T A G C G T A A C T G A C T G C G A T A G C T C G T A A G T C A C G T A C T G A G T C
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GGGAGGTTACTGC---
--NAGGTCANTGACCT
 A C T G A C T G C T A G C G T A A C T G A C T G C G A T A G C T C G T A A G T C A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGGAGGTTACTGC
-AGRGGTCA----
 A C T G A C T G C T A G C G T A A C T G A C T G C G A T A G C T C G T A A G T C A C G T A C T G A G T C
A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GGGAGGTTACTGC
-TRAGGTCA----
 A C T G A C T G C T A G C G T A A C T G A C T G C G A T A G C T C G T A A G T C A C G T A C T G A G T C
A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:7
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GGGAGGTTACTGC
GTATTGGGTGGGTAATT-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T A G C G T A A C T G A C T G C G A T A G C T C G T A A G T C A C G T A C T G A G T C
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GGGAGGTTACTGC------
--AATCGCACTGCATTCCG
 A C T G A C T G C T A G C G T A A C T G A C T G C G A T A G C T C G T A A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GGGAGGTTACTGC------
---GGGTTACTANAGGTCA
 A C T G A C T G C T A G C G T A A C T G A C T G C G A T A G C T C G T A A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGGAGGTTACTGC------
NNGAGGTTACTNNAGGTCA
 A C T G A C T G C T A G C G T A A C T G A C T G C G A T A G C T C G T A A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T G A C G T C A T C A G T C G A C A T G C A T G A G C T G A C T G C T A G A T C G A C T G A C T A G C T T C G A C T A G C A T G C A G T A G T C T C G A