Information for 1-GGCCGCCATCTTG (Motif 1)

A T C G A C T G G A T C T A G C A C T G G T A C A T G C G T C A A G C T A G T C C G A T A C G T C T A G
Reverse Opposite:
A G T C C G T A C G T A C T A G C T G A A C G T A T C G A C T G G T A C A T C G C A T G T G A C A T G C
p-value:1e-69
log p-value:-1.590e+02
Information Content per bp:1.752
Number of Target Sequences with motif96.0
Percentage of Target Sequences with motif11.79%
Number of Background Sequences with motif452.0
Percentage of Background Sequences with motif0.98%
Average Position of motif in Targets52.1 +/- 20.3bp
Average Position of motif in Background52.5 +/- 34.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.99
Offset:1
Orientation:reverse strand
Alignment:GGCCGCCATCTTG
-GCCGCCATCTTG
 A T C G A C T G G A T C T A G C A C T G G T A C A T G C G T C A A G C T A G T C C G A T A C G T C T A G
A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:GGCCGCCATCTTG
-GCNGCCATCTTG
 A T C G A C T G G A T C T A G C A C T G G T A C A T G C G T C A A G C T A G T C C G A T A C G T C T A G
A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GGCCGCCATCTTG
GTCCGCCATTA--
 A T C G A C T G G A T C T A G C A C T G G T A C A T G C G T C A A G C T A G T C C G A T A C G T C T A G
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GGCCGCCATCTTG
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A T C G A C T G G A T C T A G C A C T G G T A C A T G C G T C A A G C T A G T C C G A T A C G T C T A G
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GGCCGCCATCTTG-
----GCCATCTGTT
 A T C G A C T G G A T C T A G C A C T G G T A C A T G C G T C A A G C T A G T C C G A T A C G T C T A G A C G T
A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

E2F2/MA0864.1/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GGCCGCCATCTTG
AAAATGGCGCCATTTT-
 A C G T A C G T A C G T A C G T A T C G A C T G G A T C T A G C A C T G G T A C A T G C G T C A A G C T A G T C C G A T A C G T C T A G
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C T A G C G C T A G C A T C G A T C G A T C G A T A C G T

E2F3/MA0469.2/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GGCCGCCATCTTG
AAAAATGGCGCCATTTTT
 A C G T A C G T A C G T A C G T A C G T A T C G A C T G G A T C T A G C A C T G G T A C A T G C G T C A A G C T A G T C C G A T A C G T C T A G
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGCCGCCATCTTG----
CCNNACCATCTGGCCTN
 A T C G A C T G G A T C T A G C A C T G G T A C A T G C G T C A A G C T A G T C C G A T A C G T C T A G A C G T A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GGCCGCCATCTTG-
----ACCATCTGTT
 A T C G A C T G G A T C T A G C A C T G G T A C A T G C G T C A A G C T A G T C C G A T A C G T C T A G A C G T
A C G T A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGCCGCCATCTTG------
ANAGTGCCACCTGGTGGCCA
 A C G T A T C G A C T G G A T C T A G C A C T G G T A C A T G C G T C A A G C T A G T C C G A T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A