Information for 5-RGTGCTCTGAAAGTCW (Motif 8)

C T G A A T C G C A G T A C T G A T G C A C G T A G T C A C G T A T C G G T C A C T G A C G T A T A C G A G C T A G T C C G T A
Reverse Opposite:
C G A T A C T G T C G A A T G C A C G T A G C T A C G T A T G C G T C A A C T G G T C A T A C G G T A C G T C A A T G C G A C T
p-value:1e-11
log p-value:-2.748e+01
Information Content per bp:1.721
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.3 +/- 21.7bp
Average Position of motif in Background38.1 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.55
Offset:8
Orientation:forward strand
Alignment:RGTGCTCTGAAAGTCW-
--------AAAAGTCAA
 C T G A A T C G C A G T A C T G A T G C A C G T A G T C A C G T A T C G G T C A C T G A C G T A T A C G A G C T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:RGTGCTCTGAAAGTCW
-----TTTGAAACCG-
 C T G A A T C G C A G T A C T G A T G C A C G T A G T C A C G T A T C G G T C A C T G A C G T A T A C G A G C T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.53
Offset:5
Orientation:forward strand
Alignment:RGTGCTCTGAAAGTCW
-----ACTGAAACCA-
 C T G A A T C G C A G T A C T G A T G C A C G T A G T C A C G T A T C G G T C A C T G A C G T A T A C G A G C T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:RGTGCTCTGAAAGTCW
-CTTATCTCHMCATCT
 C T G A A T C G C A G T A C T G A T G C A C G T A G T C A C G T A T C G G T C A C T G A C G T A T A C G A G C T A G T C C G T A
A C G T A T G C G A C T C G A T C G T A A C G T A G T C C G A T A G T C G A T C G T C A T A G C C G T A A C G T A G T C C G A T

PH0048.1_Hoxa13/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:RGTGCTCTGAAAGTCW
AAACCTCGTAAAATTT
 C T G A A T C G C A G T A C T G A T G C A C G T A G T C A C G T A T C G G T C A C T G A C G T A T A C G A G C T A G T C C G T A
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

PH0068.1_Hoxc13/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:RGTGCTCTGAAAGTCW
AAAGCTCGTAAAATTT
 C T G A A T C G C A G T A C T G A T G C A C G T A G T C A C G T A T C G G T C A C T G A C G T A T A C G A G C T A G T C C G T A
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

PB0099.1_Zfp691_1/Jaspar

Match Rank:7
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----RGTGCTCTGAAAGTCW
CGAACAGTGCTCACTAT----
 A C G T A C G T A C G T A C G T A C G T C T G A A T C G C A G T A C T G A T G C A C G T A G T C A C G T A T C G G T C A C T G A C G T A T A C G A G C T A G T C C G T A
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T A C G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:8
Score:0.51
Offset:7
Orientation:forward strand
Alignment:RGTGCTCTGAAAGTCW--
-------TCAAGGTCATA
 C T G A A T C G C A G T A C T G A T G C A C G T A G T C A C G T A T C G G T C A C T G A C G T A T A C G A G C T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

HOXC13/MA0907.1/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:RGTGCTCTGAAAGTCW
---GCTCGTAAAAA--
 C T G A A T C G C A G T A C T G A T G C A C G T A G T C A C G T A T C G G T C A C T G A C G T A T A C G A G C T A G T C C G T A
A C G T A C G T A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:RGTGCTCTGAAAGTCW
--AGGTCTCTAACC--
 C T G A A T C G C A G T A C T G A T G C A C G T A G T C A C G T A T C G G T C A C T G A C G T A T A C G A G C T A G T C C G T A
A C G T A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C A C G T A C G T