Information for 9-CTAGGTGCAG (Motif 41)

A G T C A C G T G T C A A C T G C T A G A C G T A C T G A G T C G T C A C T A G
Reverse Opposite:
A G T C C A G T A C T G G T A C C G T A A G T C A G T C A C G T C G T A C T A G
p-value:1e-7
log p-value:-1.648e+01
Information Content per bp:1.801
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif79.9
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets53.0 +/- 21.5bp
Average Position of motif in Background52.8 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTAGGTGCAG
--AGGTGTCA
 A G T C A C G T G T C A A C T G C T A G A C G T A C T G A G T C G T C A C T A G
A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A

TCF4/MA0830.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTAGGTGCAG
NNCAGGTGCG-
 A C G T A G T C A C G T G T C A A C T G C T A G A C G T A C T G A G T C G T C A C T A G
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CTAGGTGCAG---
ATCCACAGGTGCGAAAA
 A C G T A C G T A C G T A C G T A G T C A C G T G T C A A C T G C T A G A C G T A C T G A G T C G T C A C T A G A C G T A C G T A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

ID4/MA0824.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTAGGTGCAG
GACAGGTGTN-
 A C G T A G T C A C G T G T C A A C T G C T A G A C G T A C T G A G T C G T C A C T A G
C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T

ISL2/MA0914.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTAGGTGCAG
TTAAGTGC--
 A G T C A C G T G T C A A C T G C T A G A C G T A C T G A G T C G T C A C T A G
G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CTAGGTGCAG-
TACCCTAGTTACCGA
 A C G T A C G T A C G T A C G T A G T C A C G T G T C A A C T G C T A G A C G T A C T G A G T C G T C A C T A G A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTAGGTGCAG
-TACGTGCV-
 A G T C A C G T G T C A A C T G C T A G A C G T A C T G A G T C G T C A C T A G
A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T

TCF3/MA0522.2/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTAGGTGCAG
NNCAGGTGTN-
 A C G T A G T C A C G T G T C A A C T G C T A G A C G T A C T G A G T C G T C A C T A G
G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTAGGTGCAG----
GCGGAGGTGTCGCCTC
 A C G T A C G T A G T C A C G T G T C A A C T G C T A G A C G T A C T G A G T C G T C A C T A G A C G T A C G T A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTAGGTGCAG
NNCAGGTGNN-
 A C G T A G T C A C G T G T C A A C T G C T A G A C G T A C T G A G T C G T C A C T A G
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T