Information for 2-AHCTGCCATTCTGCTC (Motif 2)

C T G A G C T A A G T C G A C T A T C G T A G C G T A C G T C A A G C T A C G T A T G C A C G T A T C G T G A C A G C T G A T C
Reverse Opposite:
C T A G C T G A A C T G A T G C C G T A A T C G G T C A C T G A C A G T A C T G A T C G A T G C C G T A A C T G C G A T A G C T
p-value:1e-13
log p-value:-3.177e+01
Information Content per bp:1.721
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif8.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.6 +/- 29.7bp
Average Position of motif in Background58.1 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myb/MA0100.2/Jaspar

Match Rank:1
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AHCTGCCATTCTGCTC
CCAACTGCCA--------
 A C G T A C G T C T G A G C T A A G T C G A C T A T C G T A G C G T A C G T C A A G C T A C G T A T G C A C G T A T C G T G A C A G C T G A T C
A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AHCTGCCATTCTGCTC
--CTGGCAGNCTGCCA
 C T G A G C T A A G T C G A C T A T C G T A G C G T A C G T C A A G C T A C G T A T G C A C G T A T C G T G A C A G C T G A T C
A C G T A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AHCTGCCATTCTGCTC
CAKCTGKYCYYTTYCCC
 A C G T C T G A G C T A A G T C G A C T A T C G T A G C G T A C G T C A A G C T A C G T A T G C A C G T A T C G T G A C A G C T G A T C
T G A C G C T A A C G T T G A C C G A T A C T G A C T G A G T C A G T C A G T C A G C T A G C T A G C T A G C T G A T C T G A C G T A C

PB0149.1_Myb_2/Jaspar

Match Rank:4
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----AHCTGCCATTCTGCTC
CGACCAACTGCCATGC-----
 A C G T A C G T A C G T A C G T A C G T C T G A G C T A A G T C G A C T A T C G T A G C G T A C G T C A A G C T A C G T A T G C A C G T A T C G T G A C A G C T G A T C
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C A C G T A C G T A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:5
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AHCTGCCATTCTGCTC
CCAACTGCCA--------
 A C G T A C G T C T G A G C T A A G T C G A C T A T C G T A G C G T A C G T C A A G C T A C G T A T G C A C G T A T C G T G A C A G C T G A T C
A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---AHCTGCCATTCTGCTC
CTTATCTCHMCATCT----
 A C G T A C G T A C G T C T G A G C T A A G T C G A C T A T C G T A G C G T A C G T C A A G C T A C G T A T G C A C G T A T C G T G A C A G C T G A T C
A T G C G A C T C G A T C G T A A C G T A G T C C G A T A G T C G A T C G T C A T A G C C G T A A C G T A G T C C G A T A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:AHCTGCCATTCTGCTC
-GCNGCCATCTTG---
 C T G A G C T A A G T C G A C T A T C G T A G C G T A C G T C A A G C T A C G T A T G C A C G T A T C G T G A C A G C T G A T C
A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:8
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----AHCTGCCATTCTGCTC
NNNCAGCTGTCAATATN---
 A C G T A C G T A C G T A C G T C T G A G C T A A G T C G A C T A T C G T A G C G T A C G T C A A G C T A C G T A T G C A C G T A T C G T G A C A G C T G A T C
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:AHCTGCCATTCTGCTC-
-CTTGGCANNNTGCCAA
 C T G A G C T A A G T C G A C T A T C G T A G C G T A C G T C A A G C T A C G T A T G C A C G T A T C G T G A C A G C T G A T C A C G T
A C G T A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-AHCTGCCATTCTGCTC
GGTCTGGCAT-------
 A C G T C T G A G C T A A G T C G A C T A T C G T A G C G T A C G T C A A G C T A C G T A T G C A C G T A T C G T G A C A G C T G A T C
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T