Information for 21-CTCGGCCCTGGCA (Motif 29)

A G T C A C G T A G T C C T A G A C T G A G T C A G T C A G T C A C G T A C T G A C T G A G T C G T C A
Reverse Opposite:
A C G T A C T G A G T C A G T C C G T A A C T G C T A G A C T G A G T C A G T C A C T G C G T A A C T G
p-value:1e-5
log p-value:-1.336e+01
Information Content per bp:1.926
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.31%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.2 +/- 15.5bp
Average Position of motif in Background78.7 +/- 3.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:CTCGGCCCTGGCA-
------CTTGGCAA
 A G T C A C G T A G T C C T A G A C T G A G T C A G T C A G T C A C G T A C T G A C T G A G T C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CTCGGCCCTGGCA--
------NTTGGCANN
 A G T C A C G T A G T C C T A G A C T G A G T C A G T C A G T C A C G T A C T G A C T G A G T C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.58
Offset:7
Orientation:forward strand
Alignment:CTCGGCCCTGGCA
-------TTGGCA
 A G T C A C G T A G T C C T A G A C T G A G T C A G T C A G T C A C G T A C T G A C T G A G T C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTCGGCCCTGGCA---
--ATGCCCGGGCATGT
 A G T C A C G T A G T C C T A G A C T G A G T C A G T C A G T C A C G T A C T G A C T G A G T C G T C A A C G T A C G T A C G T
A C G T A C G T G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CTCGGCCCTGGCA-
----GGTCTGGCAT
 A G T C A C G T A G T C C T A G A C T G A G T C A G T C A G T C A C G T A C T G A C T G A G T C G T C A A C G T
A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTCGGCCCTGGCA--
NTNGCCTCAGGCNNN
 A G T C A C G T A G T C C T A G A C T G A G T C A G T C A G T C A C G T A C T G A C T G A G T C G T C A A C G T A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

EGR3/MA0732.1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTCGGCCCTGGCA--
CTACGCCCACGCACT
 A G T C A C G T A G T C C T A G A C T G A G T C A G T C A G T C A C G T A C T G A C T G A G T C G T C A A C G T A C G T
G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CTCGGCCCTGGCA-
------GCTGTCAA
 A G T C A C G T A G T C C T A G A C T G A G T C A G T C A G T C A C G T A C T G A C T G A G T C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CTCGGCCCTGGCA--
-----NNTTGGCANN
 A G T C A C G T A G T C C T A G A C T G A G T C A G T C A G T C A C G T A C T G A C T G A G T C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CTCGGCCCTGGCA
---TGCCCAGNHW
 A G T C A C G T A G T C C T A G A C T G A G T C A G T C A G T C A C G T A C T G A C T G A G T C G T C A
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A