Information for 8-CTCAGCCTCTTGC (Motif 8)

A G T C A C G T A T G C C G T A A C T G G T A C A G T C C G A T A G T C A C G T A C G T T A C G A G T C
Reverse Opposite:
A C T G A G T C C G T A C G T A A C T G C G T A A C T G A C T G A G T C A C G T A T C G C G T A A C T G
p-value:1e-12
log p-value:-2.983e+01
Information Content per bp:1.905
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.7 +/- 17.7bp
Average Position of motif in Background61.2 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTCAGCCTCTTGC
GCTCGGSCTC----
 A C G T A G T C A C G T A T G C C G T A A C T G G T A C A G T C C G A T A G T C A C G T A C G T T A C G A G T C
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T

Crx/MA0467.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTCAGCCTCTTGC
CTAATCCTCTT--
 A G T C A C G T A T G C C G T A A C T G G T A C A G T C C G A T A G T C A C G T A C G T T A C G A G T C
G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTCAGCCTCTTGC----
-TAAGCCACTTGAAATT
 A G T C A C G T A T G C C G T A A C T G G T A C A G T C C G A T A G T C A C G T A C G T T A C G A G T C A C G T A C G T A C G T A C G T
A C G T A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

Mafb/MA0117.2/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTCAGCCTCTTGC
NGTCAGCANTTT--
 A C G T A G T C A C G T A T G C C G T A A C T G G T A C A G T C C G A T A G T C A C G T A C G T T A C G A G T C
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTCAGCCTCTTGC
-BCAGACWA----
 A G T C A C G T A T G C C G T A A C T G G T A C A G T C C G A T A G T C A C G T A C G T T A C G A G T C
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTCAGCCTCTTGC----
-TAAGCCACTTAACATT
 A G T C A C G T A T G C C G T A A C T G G T A C A G T C C G A T A G T C A C G T A C G T T A C G A G T C A C G T A C G T A C G T A C G T
A C G T C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T

PH0113.1_Nkx2-4/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTCAGCCTCTTGC----
-TAAGCCACTTGAAATT
 A G T C A C G T A T G C C G T A A C T G G T A C A G T C C G A T A G T C A C G T A C G T T A C G A G T C A C G T A C G T A C G T A C G T
A C G T G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

MAFK/MA0496.1/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CTCAGCCTCTTGC
CTGAGTCAGCAATTT--
 A C G T A C G T A C G T A C G T A G T C A C G T A T G C C G T A A C T G G T A C A G T C C G A T A G T C A C G T A C G T T A C G A G T C
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTCAGCCTCTTGC----
-TAAGCCACTTGAATTT
 A G T C A C G T A T G C C G T A A C T G G T A C A G T C C G A T A G T C A C G T A C G T T A C G A G T C A C G T A C G T A C G T A C G T
A C G T G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CTCAGCCTCTTGC
HWWGTCAGCAWWTTT-
 A C G T A C G T A C G T A G T C A C G T A T G C C G T A A C T G G T A C A G T C C G A T A G T C A C G T A C G T T A C G A G T C
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T A C G T