Information for 17-CGAACTATTT (Motif 27)

A T G C A T C G C T G A C T G A A G T C A C G T C G T A A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C G T C G T A A C T G A G C T A G C T A T G C A T C G
p-value:1e-7
log p-value:-1.619e+01
Information Content per bp:1.890
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.8 +/- 28.4bp
Average Position of motif in Background74.0 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.76
Offset:4
Orientation:reverse strand
Alignment:CGAACTATTT----
----CTATTTTTGG
 A T G C A T C G C T G A C T G A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:CGAACTATTT-----
---KCTATTTTTRGH
 A T G C A T C G C T G A C T G A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:3
Score:0.72
Offset:3
Orientation:forward strand
Alignment:CGAACTATTT-----
---GCTATTTTTGGM
 A T G C A T C G C T G A C T G A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

MEF2C/MA0497.1/Jaspar

Match Rank:4
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CGAACTATTT-------
--TTCTATTTTTAGNNN
 A T G C A T C G C T G A C T G A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:5
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CGAACTATTT-----
---GCTATTTTTAGC
 A T G C A T C G C T G A C T G A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

MEF2B/MA0660.1/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CGAACTATTT-----
---GCTATTTATAGC
 A T G C A T C G C T G A C T G A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

PH0028.1_En1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CGAACTATTT-----
GCGAACTAATTAATGC
 A C G T A T G C A T C G C T G A C T G A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C A G T A G C T A C G T G C A T G C A A G T C A G C T C T G A C T G A C G A T A C G T C T G A C T G A A C G T C T A G T A G C

PB0175.1_Sox4_2/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CGAACTATTT----
TNCNNAACAATTTTTNC
 A C G T A C G T A C G T A T G C A T C G C T G A C T G A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

MEF2D/MA0773.1/Jaspar

Match Rank:9
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CGAACTATTT-----
---TCTATTTATAGN
 A T G C A T C G C T G A C T G A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

MF0010.1_Homeobox_class/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CGAACTATTT
--AATTATT-
 A T G C A T C G C T G A C T G A A G T C A C G T C G T A A C G T A C G T A C G T
A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T