Information for 8-RGCCTGSSGTGARWCM (Motif 22)

C T A G A C T G G T A C A G T C A C G T A C T G A T G C A T C G A T C G A C G T A C T G G T C A C T A G C G A T A G T C G T C A
Reverse Opposite:
A C G T A C T G C G T A A G T C A C G T A G T C C G T A A T G C A T G C T A C G A G T C C G T A A C T G A C T G A G T C A G T C
p-value:1e-8
log p-value:-2.072e+01
Information Content per bp:1.846
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 21.5bp
Average Position of motif in Background67.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SREBF1/MA0595.1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:RGCCTGSSGTGARWCM
---GTGGGGTGAT---
 C T A G A C T G G T A C A G T C A C G T A C T G A T G C A T C G A T C G A C G T A C T G G T C A C T A G C G A T A G T C G T C A
A C G T A C G T A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:RGCCTGSSGTGARWCM
---ATGGGGTGAT---
 C T A G A C T G G T A C A G T C A C G T A C T G A T G C A T C G A T C G A C G T A C T G G T C A C T A G C G A T A G T C G T C A
A C G T A C G T A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:RGCCTGSSGTGARWCM
---ATGGGGTGAT---
 C T A G A C T G G T A C A G T C A C G T A C T G A T G C A T C G A T C G A C G T A C T G G T C A C T A G C G A T A G T C G T C A
A C G T A C G T A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-RGCCTGSSGTGARWCM
NNTCCTGCTGTGNNN--
 A C G T C T A G A C T G G T A C A G T C A C G T A C T G A T G C A T C G A T C G A C G T A C T G G T C A C T A G C G A T A G T C G T C A
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-RGCCTGSSGTGARWCM
TNTCCTGCTGTGNNG--
 A C G T C T A G A C T G G T A C A G T C A C G T A C T G A T G C A T C G A T C G A C G T A C T G G T C A C T A G C G A T A G T C G T C A
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:RGCCTGSSGTGARWCM
-GYCTGGYYTNTGTCA
 C T A G A C T G G T A C A G T C A C G T A C T G A T G C A T C G A T C G A C G T A C T G G T C A C T A G C G A T A G T C G T C A
A C G T A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--RGCCTGSSGTGARWCM
ATTGCCTGAGGCAAT---
 A C G T A C G T C T A G A C T G G T A C A G T C A C G T A C T G A T G C A T C G A T C G A C G T A C T G G T C A C T A G C G A T A G T C G T C A
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T A C G T A C G T

FOSL1/MA0477.1/Jaspar

Match Rank:8
Score:0.57
Offset:7
Orientation:forward strand
Alignment:RGCCTGSSGTGARWCM--
-------GGTGACTCATG
 C T A G A C T G G T A C A G T C A C G T A C T G A T G C A T C G A T C G A C G T A C T G G T C A C T A G C G A T A G T C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G A C G T A C T G C G T A T A G C A C G T G T A C C G T A A C G T T A C G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-RGCCTGSSGTGARWCM
CCCCCTGCTGTG-----
 A C G T C T A G A C T G G T A C A G T C A C G T A C T G A T G C A T C G A T C G A C G T A C T G G T C A C T A G C G A T A G T C G T C A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-RGCCTGSSGTGARWCM
TCNCCTGCTGNGNNN--
 A C G T C T A G A C T G G T A C A G T C A C G T A C T G A T G C A T C G A T C G A C G T A C T G G T C A C T A G C G A T A G T C G T C A
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T