Information for 14-GGAGGCGGTGCTT (Motif 17)

A T C G C A T G C T G A A C T G A C T G A G T C A C T G A C T G A C G T A C T G G T A C A G C T A C G T
Reverse Opposite:
G T C A C T G A A C T G A G T C G T C A T A G C A G T C A C T G T G A C A G T C A G C T G A T C A T G C
p-value:1e-10
log p-value:-2.417e+01
Information Content per bp:1.838
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.6 +/- 30.9bp
Average Position of motif in Background61.0 +/- 14.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL003.1_GC-box/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGAGGCGGTGCTT
AGGGGGCGGGGCTG
 A C G T A T C G C A T G C T G A A C T G A C T G A G T C A C T G A C T G A C G T A C T G G T A C A G C T A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGAGGCGGTGCTT
GGGGGCGGGGCC-
 A T C G C A T G C T G A A C T G A C T G A G T C A C T G A C T G A C G T A C T G G T A C A G C T A C G T
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGAGGCGGTGCTT
RGKGGGCGGAGC--
 A C G T A T C G C A T G C T G A A C T G A C T G A G T C A C T G A C T G A C G T A C T G G T A C A G C T A C G T
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T

SP4/MA0685.1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGAGGCGGTGCTT-
NAAGGGGGCGTGGCTTN
 A C G T A C G T A C G T A T C G C A T G C T G A A C T G A C T G A G T C A C T G A C T G A C G T A C T G G T A C A G C T A C G T A C G T
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A

SP2/MA0516.1/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GGAGGCGGTGCTT
GGGNGGGGGCGGGGC--
 A C G T A C G T A C G T A C G T A T C G C A T G C T G A A C T G A C T G A G T C A C T G A C T G A C G T A C T G G T A C A G C T A C G T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGAGGCGGTGCTT
-GAGSCCGAGC--
 A T C G C A T G C T G A A C T G A C T G A G T C A C T G A C T G A C G T A C T G G T A C A G C T A C G T
A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGAGGCGGTGCTT
GGGGGCGGGGC--
 A T C G C A T G C T G A A C T G A C T G A G T C A C T G A C T G A C G T A C T G G T A C A G C T A C G T
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGAGGCGGTGCTT-
CAAAGGCGTGGCCAG
 A C G T A T C G C A T G C T G A A C T G A C T G A G T C A C T G A C T G A C G T A C T G G T A C A G C T A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

PB0117.1_Eomes_2/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGAGGCGGTGCTT-
GCGGAGGTGTCGCCTC
 A C G T A C G T A T C G C A T G C T G A A C T G A C T G A G T C A C T G A C T G A C G T A C T G G T A C A G C T A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GGAGGCGGTGCTT----
--AGATGCTRCTRCCHT
 A T C G C A T G C T G A A C T G A C T G A G T C A C T G A C T G A C G T A C T G G T A C A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T