Information for 1-GCCCCGCCCT (Motif 1)

C A T G A G T C G A T C T G A C A G T C T C A G A T G C A G T C A G T C G C A T
Reverse Opposite:
C G T A C T A G A C T G A T C G A G T C T C A G A C T G C T A G T C A G G T A C
p-value:1e-31
log p-value:-7.209e+01
Information Content per bp:1.710
Number of Target Sequences with motif197.0
Percentage of Target Sequences with motif20.56%
Number of Background Sequences with motif3824.9
Percentage of Background Sequences with motif8.33%
Average Position of motif in Targets50.2 +/- 26.9bp
Average Position of motif in Background48.5 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

KLF5/MA0599.1/Jaspar

Match Rank:1
Score:0.94
Offset:0
Orientation:forward strand
Alignment:GCCCCGCCCT
GCCCCGCCCC
 C A T G A G T C G A T C T G A C A G T C T C A G A T G C A G T C A G T C G C A T
A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

Klf4/MA0039.2/Jaspar

Match Rank:2
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:GCCCCGCCCT
GCCCCACCCA
 C A T G A G T C G A T C T G A C A G T C T C A G A T G C A G T C A G T C G C A T
T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:3
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:GCCCCGCCCT
GCCMCRCCCH
 C A T G A G T C G A T C T G A C A G T C T C A G A T G C A G T C A G T C G C A T
C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:4
Score:0.92
Offset:-2
Orientation:forward strand
Alignment:--GCCCCGCCCT---
NRGCCCCRCCCHBNN
 A C G T A C G T C A T G A G T C G A T C T G A C A G T C T C A G A T G C A G T C A G T C G C A T A C G T A C G T A C G T
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

POL003.1_GC-box/Jaspar

Match Rank:5
Score:0.89
Offset:-2
Orientation:reverse strand
Alignment:--GCCCCGCCCT--
NAGCCCCGCCCCCN
 A C G T A C G T C A T G A G T C G A T C T G A C A G T C T C A G A T G C A G T C A G T C G C A T A C G T A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-GCCCCGCCCT-
GGCCCCGCCCCC
 A C G T C A T G A G T C G A T C T G A C A G T C T C A G A T G C A G T C A G T C G C A T A C G T
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-GCCCCGCCCT-
GGCCACRCCCMK
 A C G T C A T G A G T C G A T C T G A C A G T C T C A G A T G C A G T C A G T C G C A T A C G T
C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G

PB0039.1_Klf7_1/Jaspar

Match Rank:8
Score:0.87
Offset:-3
Orientation:forward strand
Alignment:---GCCCCGCCCT---
TCGACCCCGCCCCTAT
 A C G T A C G T A C G T C A T G A G T C G A T C T G A C A G T C T C A G A T G C A G T C A G T C G C A T A C G T A C G T A C G T
G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T

SP1/MA0079.3/Jaspar

Match Rank:9
Score:0.87
Offset:0
Orientation:forward strand
Alignment:GCCCCGCCCT-
GCCCCGCCCCC
 C A T G A G T C G A T C T G A C A G T C T C A G A T G C A G T C A G T C G C A T A C G T
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:GCCCCGCCCT--
GCTCCGCCCMCY
 C A T G A G T C G A T C T G A C A G T C T C A G A T G C A G T C A G T C G C A T A C G T A C G T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T