Information for 6-TGAAGCGTGT (Motif 9)

A C G T A C T G C G T A C T G A A C T G A G T C A C T G A C G T C T A G A C G T
Reverse Opposite:
C G T A A G T C C G T A A G T C A C T G A G T C A G C T A C G T A G T C C G T A
p-value:1e-15
log p-value:-3.532e+01
Information Content per bp:1.942
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.7 +/- 27.3bp
Average Position of motif in Background64.1 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TGAAGCGTGT
---TGCGTG-
 A C G T A C T G C G T A C T G A A C T G A G T C A C T G A C G T C T A G A C G T
A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T

Pax6/MA0069.1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TGAAGCGTGT-
AANTCATGCGTGAA
 A C G T A C G T A C G T A C G T A C T G C G T A C T G A A C T G A G T C A C T G A C G T C T A G A C G T A C G T
G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGAAGCGTGT
NGAAGC----
 A C G T A C T G C G T A C T G A A C T G A G T C A C T G A C G T C T A G A C G T
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TGAAGCGTGT
--AAGCTTG-
 A C G T A C T G C G T A C T G A A C T G A G T C A C T G A C G T C T A G A C G T
A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T

Hes1/MA1099.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGAAGCGTGT-
-NNCGCGTGNN
 A C G T A C T G C G T A C T G A A C T G A G T C A C T G A C G T C T A G A C G T A C G T
A C G T C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C

PAX1/MA0779.1/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TGAAGCGTGT--
NGCANTCATGCGTGACG
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C T G A A C T G A G T C A C T G A C G T C T A G A C G T A C G T A C G T
C A G T A C T G G T A C C T G A A T C G A G C T T A G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A G T A C T A C G

PAX9/MA0781.1/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TGAAGCGTGT--
TGCAGTCATGCGTGACG
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C T G A A C T G A G T C A C T G A C G T C T A G A C G T A C G T A C G T
C A G T A C T G G T A C C T G A A T C G A G C T A T G C C T G A C G A T A T C G A G T C C T A G A C G T C T A G C G T A G T A C T A C G

PB0180.1_Sp4_2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGAAGCGTGT----
CAAAGGCGTGGCCAG
 A C G T A C G T A C T G C G T A C T G A A C T G A G T C A C T G A C G T C T A G A C G T A C G T A C G T A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

PB0147.1_Max_2/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGAAGCGTGT---
NNGTCGCGTGNCAC
 A C G T A C G T A C T G C G T A C T G A A C T G A G T C A C T G A C G T C T A G A C G T A C G T A C G T A C G T
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TGAAGCGTGT--
--TTGCGTGCVA
 A C G T A C T G C G T A C T G A A C T G A G T C A C T G A C G T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A