Information for 23-GAGAGCACCC (Motif 31)

A C T G C G T A A T C G C G T A C T A G A G T C C G T A A G T C G A T C A G T C
Reverse Opposite:
A C T G C A T G A C T G A C G T A C T G A G T C A C G T A T G C A C G T A G T C
p-value:1e-7
log p-value:-1.704e+01
Information Content per bp:1.917
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif41.4
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets37.2 +/- 25.4bp
Average Position of motif in Background42.9 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GAGAGCACCC---
-GGACCACCCACG
 A C T G C G T A A T C G C G T A C T A G A G T C C G T A A G T C G A T C A G T C A C G T A C G T A C G T
A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

GLI2/MA0734.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GAGAGCACCC--
GCGACCACACTG
 A C T G C G T A A T C G C G T A C T A G A G T C C G T A A G T C G A T C A G T C A C G T A C G T
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GAGAGCACCC
GGGAGGACNG
 A C T G C G T A A T C G C G T A C T A G A G T C C G T A A G T C G A T C A G T C
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GAGAGCACCC----
CATAAGACCACCATTAC
 A C G T A C G T A C G T A C T G C G T A A T C G C G T A C T A G A G T C C G T A A G T C G A T C A G T C A C G T A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

PB0099.1_Zfp691_1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GAGAGCACCC----
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C T G C G T A A T C G C G T A C T A G A G T C C G T A A G T C G A T C A G T C A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

PB0139.1_Irf5_2/Jaspar

Match Rank:6
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GAGAGCACCC
TTGACCGAGAATTCC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A T C G C G T A C T A G A G T C C G T A A G T C G A T C A G T C
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T

ZBTB7A/MA0750.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAGAGCACCC-
GGCGACCACCGA
 A C G T A C T G C G T A A T C G C G T A C T A G A G T C C G T A A G T C G A T C A G T C A C G T
A C T G T C A G A T G C C T A G G T C A A G T C A T G C G T C A A G T C G T A C C A T G T G C A

PB0052.1_Plagl1_1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GAGAGCACCC----
TTGGGGGCGCCCCTAG
 A C G T A C G T A C T G C G T A A T C G C G T A C T A G A G T C C G T A A G T C G A T C A G T C A C G T A C G T A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

ZBTB7C/MA0695.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAGAGCACCC--
GCGACCACCGAA
 A C T G C G T A A T C G C G T A C T A G A G T C C G T A A G T C G A T C A G T C A C G T A C G T
C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A

NR4A2/MA0160.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAGAGCACCC
AAGGTCAC--
 A C T G C G T A A T C G C G T A C T A G A G T C C G T A A G T C G A T C A G T C
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T