Information for 14-TGCAGCCGGAACT (Motif 19)

A C G T C T A G A G T C C G T A A C T G A G T C A T G C C T A G C T A G C T G A C G T A A G T C C G A T
Reverse Opposite:
C G T A A C T G A C G T A G C T A G T C A G T C A T C G A C T G A G T C A C G T A C T G A G T C C G T A
p-value:1e-12
log p-value:-2.816e+01
Information Content per bp:1.856
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif18.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets40.6 +/- 28.9bp
Average Position of motif in Background57.8 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TGCAGCCGGAACT
--CAGCC------
 A C G T C T A G A G T C C G T A A C T G A G T C A T G C C T A G C T A G C T G A C G T A A G T C C G A T
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

MTF1/MA0863.1/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TGCAGCCGGAACT
TTTGCACACGGCAC-
 A C G T A C G T A C G T C T A G A G T C C G T A A C T G A G T C A T G C C T A G C T A G C T G A C G T A A G T C C G A T
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C A C G T

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TGCAGCCGGAACT
---ANCCGGAAGT
 A C G T C T A G A G T C C G T A A C T G A G T C A T G C C T A G C T A G C T G A C G T A A G T C C G A T
A C G T A C G T A C G T C T G A T G C A T A G C T G A C T A C G T C A G C T G A G C T A T C A G G A C T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TGCAGCCGGAACT-
----CCAGGAACAG
 A C G T C T A G A G T C C G T A A C T G A G T C A T G C C T A G C T A G C T G A C G T A A G T C C G A T A C G T
A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TGCAGCCGGAACT
-BCAGACWA----
 A C G T C T A G A G T C C G T A A C T G A G T C A T G C C T A G C T A G C T G A C G T A A G T C C G A T
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TGCAGCCGGAACT-
----RCCGGAAGTD
 A C G T C T A G A G T C C G T A A C T G A G T C A T G C C T A G C T A G C T G A C G T A A G T C C G A T A C G T
A C G T A C G T A C G T A C G T C T G A T A G C T G A C T A C G T C A G G C T A G C T A T C A G A G C T C T A G

ETS(ETS)/Promoter/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TGCAGCCGGAACT
---AACCGGAAGT
 A C G T C T A G A G T C C G T A A C T G A G T C A T G C C T A G C T A G C T G A C G T A A G T C C G A T
A C G T A C G T A C G T T G C A T C G A T A G C G T A C T C A G C T A G G T C A G C T A T C A G G A C T

PB0077.1_Spdef_1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGCAGCCGGAACT--
GTACATCCGGATTTTT
 A C G T A C G T C T A G A G T C C G T A A C T G A G T C A T G C C T A G C T A G C T G A C G T A A G T C C G A T A C G T A C G T
T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGCAGCCGGAACT
CACAGN-------
 A C G T C T A G A G T C C G T A A C T G A G T C A T G C C T A G C T A G C T G A C G T A A G T C C G A T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EHF/MA0598.2/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TGCAGCCGGAACT-
--AACCCGGAAGTA
 A C G T C T A G A G T C C G T A A C T G A G T C A T G C C T A G C T A G C T G A C G T A A G T C C G A T A C G T
A C G T A C G T G C T A G C T A T A G C T A G C T G A C T C A G A C T G G T C A T G C A T C A G G A C T C T G A